RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 ASRGL1Q7L266 308 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 NLRP9Q7RTR0 991 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 SLC29A4Q7RTT9 530 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 TFAP2DQ7Z6R9 452 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CMC1Q7Z7K0 106 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 KCNMB4Q86W47 210 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CEP57Q86XR8 500 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CNTN4Q8IWV2 1026 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 NDUFAF2Q8N183 169 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 UMODL1-AS1Q8N2C9 162 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 KIF2BQ8N4N8 673 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 DCLK2Q8N568 766 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 ACVR1CQ8NER5 493 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 IPMKQ8NFU5 416 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 SPPL2BQ8TCT7 592 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 ZNF398Q8TD17 642 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CDKL2Q92772 493 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 TADA1Q96BN2 335 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 DAZAP1Q96EP5 407 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 C1orf74Q96LT6 269 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 ADAD1Q96M93 576 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 PRICKLE1Q96MT3 831 aaPredicted RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 ZNF778Q96MU6 729 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 DEFB118Q96PH6 123 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 KLHL5Q96PQ7 755 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CDK5RAP1Q96SZ6 601 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 AGAP2Q99490 1192 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 RBBP8Q99708 897 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CPNE1Q99829 537 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 KIFC1Q9BW19 673 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 TSSK1BQ9BXA7 367 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 SEZ6LQ9BYH1 1024 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 IL22Q9GZX6 179 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 HIPK3Q9H422 1215 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 CWH43Q9H720 699 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 KCNK13Q9HB14 408 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 MRM3Q9HC36 420 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 ENTPD7Q9NQZ7 604 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 SNTG1Q9NSN8 517 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 ARL8BQ9NVJ2 186 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 COMMD8Q9NX08 183 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 BFARQ9NZS9 450 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 SEMA5BQ9P283 1151 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 IPO11Q9UI26 975 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 TBX21Q9UL17 535 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 HBS1LQ9Y450 684 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 TESMINQ9Y4I5 508 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 MAGED1Q9Y5V3 778 aaPredicted RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 USH1CQ9Y6N9 552 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 SCN5AQ14524 2016 aa4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 MYO18AQ92614 2054 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 FNDC1Q4ZHG4 1894 aaPredicted RBP4.71□□□□□ -1.66
CTNNA1-212ENST00000518919 MICAL3Q7RTP6 2002 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 MYLKQ15746 1914 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 TMEM247A6NEH6 219 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 CFAP73A6NFT4 308 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 GOLGA8TH3BQL2 631 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 J3KR12 359 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 BIRC5O15392 142 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 PSMD3O43242 534 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 GLRA3O75311 464 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 ANXA9O76027 345 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 GJB5O95377 273 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 PGM3O95394 542 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 TGDSO95455 350 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 SEC24AO95486 1093 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 APOA4P06727 396 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 ENO1P06733 434 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 HMBSP08397 361 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 T-ENOLP0DO92 83 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 HKR1P10072 659 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 TROVE2P10155 538 aaKnown RBP eCLIP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 SLC2A3P11169 496 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 CCL5P13501 91 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 NQO1P15559 274 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 ZNF8P17098 575 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 TACR2P21452 398 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 HOXD9P28356 352 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 ALDH3A1P30838 453 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 ARRB2P32121 409 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 ACVRL1P37023 503 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 SKIV2L2P42285 1042 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 ARCN1P48444 511 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 NPY2RP49146 381 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 CLK3P49761 638 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 SERPINB8P50452 374 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 ZNF84P51523 738 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 SGSHP51688 502 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 NDST2P52849 883 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 GEMP55040 296 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 PRAMEP78395 509 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 IRX4P78413 519 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 ELF3P78545 371 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 SMARCB1Q12824 385 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 ELAVL2Q12926 359 aaKnown RBP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 MSLNQ13421 630 aaPredicted RBP4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 PRPSAP1Q14558 356 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 POU6F1Q14863 301 aa4.7□□□□□ -1.66
CTNNA1-212ENST00000518919 DLG2Q15700 870 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms