RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 ERICH5Q6P6B1 374 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 TTC23LQ6PF05 361 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 ZNF438Q7Z4V0 828 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 SH3KBP1Q96B97 665 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 TMCO6Q96DC7 493 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 MS4A4AQ96JQ5 239 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 RNF170Q96K19 258 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 SEPT5Q99719 369 aaPredicted RBP11.93□□□□□ -0.5
PCM1-203ENST00000517545 GDF15Q99988 308 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 TRIM39Q9HCM9 518 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 OLA1Q9NTK5 396 aaKnown RBP11.93□□□□□ -0.5
PCM1-203ENST00000517545 IMPAD1Q9NX62 359 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 NUFIP1Q9UHK0 495 aaKnown RBP11.93□□□□□ -0.5
PCM1-203ENST00000517545 FZD4Q9ULV1 537 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 DUSP12Q9UNI6 340 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 CHD5Q8TDI0 1954 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 KCNE1BA0A087WTH5 132 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 ACSL4O60488 711 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 ABCB1P08183 1280 aaPredicted RBP11.93□□□□□ -0.5
PCM1-203ENST00000517545 COX7A2P14406 83 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 PAX3P23760 479 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 HMGCLP35914 325 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 DAB2P98082 770 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 RING1Q06587 406 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 CXCL17Q6UXB2 119 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 VN1R5Q7Z5H4 357 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 SYT12Q8IV01 421 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 DENND1CQ8IV53 801 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 RBFAQ8N0V3 343 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 CACTIN-AS1Q8N1I8 211 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 CMTM7Q96FZ5 175 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 BBS2Q9BXC9 721 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 GRIP1Q9Y3R0 1128 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 PIKFYVEQ9Y2I7 2098 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 PLXNA3P51805 1871 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 A0A1W2PQ09 198 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 J3KTA2 159 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 ERVH48-1M5A8F1 160 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 SH3BGRLO75368 114 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 OAZ2O95190 189 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 CA8P35219 290 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 SOX3P41225 446 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 RPIAP49247 311 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 OLR1P78380 273 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 SEMG2Q02383 582 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 NFATC2Q13469 925 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 NFE2Q16621 373 aaPredicted RBP11.93□□□□□ -0.5
PCM1-203ENST00000517545 EXOC3L2Q2M3D2 409 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 LGI4Q8N135 537 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 CADM2Q8N3J6 435 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 ST13P5Q8NFI4 369 aaPredicted RBP11.93□□□□□ -0.5
PCM1-203ENST00000517545 FUBP3Q96I24 572 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCM1-203ENST00000517545 ASPNQ9BXN1 380 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 PRRG3Q9BZD7 231 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 SLC32A1Q9H598 525 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 TRAPPC4Q9Y296 219 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 KLHL20Q9Y2M5 609 aa11.93□□□□□ -0.5
PCM1-203ENST00000517545 CA12O43570 354 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 HLA-EP13747 358 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 CYP2A7P20853 494 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 TIE1P35590 1138 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 HNF4AP41235 474 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 CDH4P55283 916 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 SPIBQ01892 262 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 CSTF3Q12996 717 aaKnown RBP11.92□□□□□ -0.5
PCM1-203ENST00000517545 RNF219Q5W0B1 726 aaPredicted RBP11.92□□□□□ -0.5
PCM1-203ENST00000517545 NCEH1Q6PIU2 408 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 C19orf48Q6RUI8 117 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 CERS6Q6ZMG9 384 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 ZNF367Q7RTV3 350 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 UBE2J2Q8N2K1 259 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 SIMC1Q8NDZ2 872 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 WDR36Q8NI36 951 aaKnown RBP11.92□□□□□ -0.5
PCM1-203ENST00000517545 GTPBP3Q969Y2 492 aaKnown RBP11.92□□□□□ -0.5
PCM1-203ENST00000517545 COQ8BQ96D53 544 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 CLIP3Q96DZ5 547 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 TRMT61AQ96FX7 289 aaKnown RBP11.92□□□□□ -0.5
PCM1-203ENST00000517545 IL26Q9NPH9 171 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 ABCB8Q9NUT2 735 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 FCF1Q9Y324 198 aaKnown RBP11.92□□□□□ -0.5
PCM1-203ENST00000517545 EFCAB10A6NFE3 127 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 PRAMEF25A6NGN4 478 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 PCDH7O60245 1069 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 UGT2B17O75795 530 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 ANXA5P08758 320 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 IL7P13232 177 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 THPOP40225 353 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 DSC3Q14574 896 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 TRIM60Q495X7 471 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 FLCNQ8NFG4 579 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 COPS8Q99627 209 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 DOHHQ9BU89 302 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 PCDHGB2Q9Y5G2 931 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 PLK4O00444 970 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 FHP07954 510 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 CKMT1AP12532 417 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 ITGA2P17301 1181 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 PRPS1L1P21108 318 aa11.92□□□□□ -0.5
PCM1-203ENST00000517545 RPS3P23396 243 aaKnown RBP eCLIP11.92□□□□□ -0.5
PCM1-203ENST00000517545 ITPKAP23677 461 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms