RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 H3BQ06 376 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRIM77I1YAP6 450 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 K7EQM0 130 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 K7ERQ8 282 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 M0QZ24 198 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 M0R296 226 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SNAP23O00161 211 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 AP4M1O00189 453 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 WRBO00258 174 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CLIC1O00299 241 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC28A1O00337 649 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 EEF2KO00418 725 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRYO14603 147 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DVL1O14640 695 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DNALI1O14645 258 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRDMT1O14717 391 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAP2K7O14733 419 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 XPO1O14980 1071 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LSM1O15116 133 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARPC1BO15143 372 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 POLR1CO15160 346 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OGTO15294 1046 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ALOX15BO15296 676 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PPM1DO15297 605 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NVLO15381 856 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PSMD3O43242 534 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 AP5Z1O43299 807 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PPIP5K2O43314 1243 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MSI1O43347 362 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GRID2O43424 1007 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DCXO43602 365 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SCO2O43819 266 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SSX4O60224 188 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KLK8O60259 260 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LCMT2O60294 686 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ECE2O60344 883 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 FCMRO60667 390 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRAF2O60831 178 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CDH16O75309 829 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SNNO75324 88 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CSO75390 466 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NME6O75414 186 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CSDE1O75534 798 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CREG1O75629 220 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TOM1L1O75674 476 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GRAP2O75791 330 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SCGNO76038 276 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DFFBO76075 338 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CNTN5O94779 1100 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KDM4BO94953 1096 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR4F21O95013 312 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NDUFB4O95168 129 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 STBD1O95210 358 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SMC2O95347 1197 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PIGNO95427 931 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NFATC1O95644 943 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 POP4O95707 220 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CPNE6O95741 557 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 BAG3O95817 575 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LATS1O95835 1130 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LGI1O95970 557 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GAS8O95995 478 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MOCS2O96007 188 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SERPINA3P01011 423 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NPPAP01160 153 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 IL1BP01584 269 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRBC1P01850 177 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KRT14P02533 472 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KRT6AP02538 564 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 APOA1P02647 267 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MBPP02686 304 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHRNA1P02708 482 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MT-ND1P03886 318 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OPN1LWP04000 364 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LCATP04180 440 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CYP1A2P05177 515 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ICAM1P05362 532 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 UGT2B4P06133 528 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 S100A6P06703 90 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CRYGCP07315 174 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 FESP07332 822 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CAPN1P07384 714 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PRSS1P07477 247 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CSN3P07498 182 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 LYNP07948 512 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SFTPBP07988 381 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ELANEP08246 267 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SERPINF2P08697 491 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KRT19P08727 400 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 IL6RP08887 468 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HIST1H2AGP0C0S8 130 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SBK2P0C263 348 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKRD34CP0C6C1 535 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 IQCF3P0C7M6 154 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 RFPL3SP0C7P2 107 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR2T7P0C7T2 308 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MYZAPP0CAP1 466 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRIM49P0CI25 452 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRIM49CP0CI26 452 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TROVE2P10155 538 aaKnown RBP eCLIP0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms