RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 KCNMB4Q86W47 210 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 TMEM139Q8IV31 216 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 KBTBD2Q8IY47 623 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 SLC34A3Q8N130 599 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 OR9A1PQ8NGU1 263 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 STT3BQ8TCJ2 826 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 FAR1Q8WVX9 515 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.84□□□□□ -1.31
USP46-208ENST00000512656 SMPDL3AQ92484 453 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 INPP5DQ92835 1189 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 CCDC120Q96HB5 630 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 THOC3Q96J01 351 aaKnown RBP6.84□□□□□ -1.31
USP46-208ENST00000512656 CABS1Q96KC9 395 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 ZFYVE21Q9BQ24 234 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 KIFC1Q9BW19 673 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 ZBTB20Q9HC78 741 aaPredicted RBP6.84□□□□□ -1.31
USP46-208ENST00000512656 TREX1Q9NSU2 369 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 C14orf105Q9NVL8 296 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 C3orf18Q9UK00 162 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 GUCA1BQ9UMX6 200 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 NTNG1Q9Y2I2 539 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 NFS1Q9Y697 457 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 MAU2Q9Y6X3 613 aa6.84□□□□□ -1.31
USP46-208ENST00000512656 IGLV3-12A0A075B6K2 115 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 LOC105369274A0A096LPK9 316 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 NSG1A0A0A6YYJ2 146 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 LOC102723532A0A0G2JNH3 316 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 A0A1B0GUH1 482 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 PRAMEF27A3QJZ7 478 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 OR2A25A4D2G3 310 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 E5RI56 91 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 H0YGG7 62 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 MASP2O00187 686 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 ALOX12BO75342 701 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 VAPBO95292 243 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 MATN4O95460 622 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 CLDN1O95832 211 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 CATP04040 527 aaKnown RBP6.83□□□□□ -1.32
USP46-208ENST00000512656 ANXA5P08758 320 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 ZSCAN5DPP0CG00 497 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 ICAM2P13598 275 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 TPSB2P20231 275 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 CHRM3P20309 590 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 PSMB5P28074 263 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 NMBRP28336 390 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 DCTP40126 519 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 EMP2P54851 167 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 ARF3P61204 181 aaPredicted RBP6.83□□□□□ -1.32
USP46-208ENST00000512656 ARG2P78540 354 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 CRADDP78560 199 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 ABATP80404 500 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 RELAQ04206 551 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 TPSAB1Q15661 275 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 INAQ16352 499 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 TYSND1Q2T9J0 566 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 MEI1Q5TIA1 1274 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 GARNL3Q5VVW2 1013 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 ATG9BQ674R7 924 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 FRMPD2BQ6IN97 320 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 RPUSD3Q6P087 351 aaKnown RBP6.83□□□□□ -1.32
USP46-208ENST00000512656 LRRC8BQ6P9F7 803 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 LINC00696Q6ZRV3 163 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 NDUFAF7Q7L592 441 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 THAP5Q7Z6K1 395 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 PRUNE1Q86TP1 453 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 PRSS58Q8IYP2 241 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 OR4N4Q8N0Y3 316 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 MFSD4AQ8N468 514 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 METTL27Q8N6F8 245 aaPredicted RBP6.83□□□□□ -1.32
USP46-208ENST00000512656 BCORP1Q8N888 145 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 OR2A1Q8NGT9 310 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 GRHL3Q8TE85 626 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 LPGAT1Q92604 370 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 RERGQ96A58 199 aaPredicted RBP6.83□□□□□ -1.32
USP46-208ENST00000512656 EBNA1BP2Q99848 306 aaKnown RBP6.83□□□□□ -1.32
USP46-208ENST00000512656 DPH7Q9BTV6 452 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 ZNF160Q9HCG1 818 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 MRPS30Q9NP92 439 aaKnown RBP6.83□□□□□ -1.32
USP46-208ENST00000512656 MKKSQ9NPJ1 570 aaPredicted RBP6.83□□□□□ -1.32
USP46-208ENST00000512656 RIC8BQ9NVN3 520 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 SAMD15Q9P1V8 674 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 TRPC4Q9UBN4 977 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 OSGIN2Q9Y236 505 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 SNRNP200O75643 2136 aaKnown RBP6.83□□□□□ -1.32
USP46-208ENST00000512656 PCSK5Q92824 1860 aa6.83□□□□□ -1.32
USP46-208ENST00000512656 TEP1Q99973 2627 aaKnown RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 CACNA1DQ01668 2161 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 POLQO75417 2590 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 TRAV17A0A0B4J275 112 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 A0A0U1RQJ8 604 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 A0A1W2PPV9 198 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 A0A1W2PQ72 361 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 MAGEB16A2A368 324 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 ARHGEF33A8MVX0 844 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 IDSB3KWA1 339 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 MYO1CO00159 1063 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 LRRTM2O43300 516 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 NIPSNAP2O75323 286 aa6.82□□□□□ -1.32
USP46-208ENST00000512656 PSIP1O75475 530 aaKnown RBP6.82□□□□□ -1.32
USP46-208ENST00000512656 BMP10O95393 424 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms