RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 DENND1BQ6P3S1 775 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 NCEH1Q6PIU2 408 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 RSRC2Q7L4I2 434 aaKnown RBP6.07□□□□□ -1.44
USP53-206ENST00000510737 TMEM219Q86XT9 240 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 TMEM161BQ8NDZ6 487 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 WDR36Q8NI36 951 aaKnown RBP6.07□□□□□ -1.44
USP53-206ENST00000510737 BBS10Q8TAM1 723 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 MAPK15Q8TD08 544 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 THAP4Q8WY91 577 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 PIWIL1Q96J94 861 aaKnown RBP6.07□□□□□ -1.44
USP53-206ENST00000510737 CEP295NLQ96MC4 621 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 TMEM245Q9H330 911 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 TMEM30AQ9NV96 361 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 CISD1Q9NZ45 108 aaKnown RBP6.07□□□□□ -1.44
USP53-206ENST00000510737 DERAQ9Y315 318 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 MTORP42345 2549 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 ZFC3H1O60293 1989 aaKnown RBP6.07□□□□□ -1.44
USP53-206ENST00000510737 NUMA1Q14980 2115 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 APCP25054 2843 aa6.07□□□□□ -1.44
USP53-206ENST00000510737 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 A0A1W2PS18 150 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 F8VP50 259 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 OGTO15294 1046 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 DIAPH2O60879 1101 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 DEXIO95424 95 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 TBX18O95935 607 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 DNTTP04053 509 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 STX2P32856 288 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 HTR3AP46098 478 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 CCDC38Q502W7 563 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 PPP6R3Q5H9R7 873 aaPredicted RBP6.06□□□□□ -1.44
USP53-206ENST00000510737 HECTD3Q5T447 861 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 SNX30Q5VWJ9 437 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 CD302Q8IX05 232 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 TAS1R2Q8TE23 839 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 SLC20A1Q8WUM9 679 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 MYLPFQ96A32 169 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 SERAC1Q96JX3 654 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 NEUROG2Q9H2A3 272 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 PRSS16Q9NQE7 514 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 ABCF3Q9NUQ8 709 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 EHD2Q9NZN4 543 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 CITO14578 2027 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 NAV3Q8IVL0 2385 aa6.06□□□□□ -1.44
USP53-206ENST00000510737 NIPBLQ6KC79 2804 aaeCLIP6.05□□□□□ -1.44
USP53-206ENST00000510737 ASPDHA6ND91 283 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 FAM90A7PA6NKC0 464 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 FAM90A22PA8MWA6 464 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 FAM90A12PA8MX19 464 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 FAM90A23PA8MXZ1 464 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 HUS1O60921 280 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 NDUFB4O95168 129 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 PENKP01210 267 aaPredicted RBP6.05□□□□□ -1.44
USP53-206ENST00000510737 TK1P04183 234 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 ZDHHC11BP0C7U3 371 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 LIPCP11150 499 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 EDN2P20800 178 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 ANXA13P27216 316 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 LHX1P48742 406 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 HARS2P49590 506 aaKnown RBP6.05□□□□□ -1.44
USP53-206ENST00000510737 ACOT2P49753 483 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 PDX1P52945 283 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 EVCP57679 992 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 CLDN2P57739 230 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 KYAT1Q16773 422 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 TUBB8Q3ZCM7 444 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 C4orf50Q6ZRC1 276 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 C1orf186Q6ZWK4 172 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 ZFAND4Q86XD8 727 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 CHERPQ8IWX8 916 aaKnown RBP6.05□□□□□ -1.44
USP53-206ENST00000510737 TMEM86AQ8N2M4 240 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 FBXL16Q8N461 479 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 DMBX1Q8NFW5 382 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 UCMAQ8WVF2 138 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 RAB40AQ8WXH6 277 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 SDCCAG3Q96C92 435 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 MOCOSQ96EN8 888 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 PCED1BQ96HM7 432 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 AGXT2Q9BYV1 514 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 RWDD1Q9H446 243 aaPredicted RBP6.05□□□□□ -1.44
USP53-206ENST00000510737 ASB7Q9H672 318 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 SAYSD1Q9NPB0 183 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 FBXL12Q9NXK8 326 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 DNAJC16Q9Y2G8 782 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 C2CD2Q9Y426 696 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 PCDHGB5Q9Y5G0 923 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 MED13Q9UHV7 2174 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 PLXNA2O75051 1894 aa6.05□□□□□ -1.44
USP53-206ENST00000510737 SCN1AP35498 2009 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 LRRK1Q38SD2 2015 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 PABPN1LA6NDY0 278 aaKnown RBP6.04□□□□□ -1.44
USP53-206ENST00000510737 E9PMD0 336 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 K7EM74 188 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 TIMM44O43615 452 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 CEP104O60308 925 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 NEMFO60524 1076 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 ZNF8P17098 575 aaPredicted RBP6.04□□□□□ -1.44
USP53-206ENST00000510737 UGT1A5P35504 534 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 CCR5P51681 352 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 MMEL1Q495T6 779 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms