RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 H0Y8G0 127 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 TMEM189-UBE2V1I3L0A0 370 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SMIM22K7EJ46 135 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 VWA5AO00534 786 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 NUDT21O43809 227 aaKnown RBP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SNX3O60493 162 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 TBX19O60806 448 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 RPS6KA5O75582 802 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 KRT33AO76009 404 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 AKR7A3O95154 331 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 CXCL14O95715 111 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 WDPCPO95876 746 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 FGF2P09038 288 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 GP1BBP13224 206 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 CYP11B2P19099 503 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 GLRA2P23416 452 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 CERS1P27544 350 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 NSFP46459 744 aaKnown RBP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 KCNJ1P48048 391 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SLC6A12P48065 614 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SULT1E1P49888 294 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 CNN1P51911 297 aaKnown RBP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 MAPK12P53778 367 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SELENOVP59797 346 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 TGFB2P61812 414 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SLC3A1Q07837 685 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SLC10A2Q12908 348 aaPredicted RBP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 UBE2V1Q13404 147 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 PDIA5Q14554 519 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 RBBP7Q16576 425 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SMTNL2Q2TAL5 461 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SYT14P1Q58G82 188 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 DGLUCYQ7Z3D6 616 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 AMZ2Q86W34 360 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 ZC3HC1Q86WB0 502 aaKnown RBP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 TMEM126BQ8IUX1 230 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 CHERPQ8IWX8 916 aaKnown RBP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 COLGALT1Q8NBJ5 622 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SEMA6DQ8NFY4 1073 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 NEK11Q8NG66 645 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 THRSPQ92748 146 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 ERGIC1Q969X5 290 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 GRAMD2BQ96HH9 432 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 FAM84BQ96KN1 310 aaPredicted RBP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 GDAP1L1Q96MZ0 367 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 RAD9AQ99638 391 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 DDX50Q9BQ39 737 aaKnown RBP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SCNM1Q9BWG6 230 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 LHPPQ9H008 270 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SDCBP2Q9H190 292 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 VPS37BQ9H9H4 285 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 MAP6D1Q9H9H5 199 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SEBOXQ9HB31 216 aaPredicted RBP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 CPNE5Q9HCH3 593 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 MRPL17Q9NRX2 175 aaKnown RBP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 ACOXLQ9NUZ1 547 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SLC9A2Q9UBY0 812 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 SERGEFQ9UGK8 458 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 CDC14AQ9UNH5 594 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 ST3GAL5Q9UNP4 418 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 ERVK-19Q9WJR5 959 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.12□□□□□ -2.07
PDE4D-218ENST00000509368 HS3ST3A1Q9Y663 406 aa2.12□□□□□ -2.07
PDE4D-218ENST00000509368 UBR3Q6ZT12 1888 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 ANKRD36BQ8N2N9 1353 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 HEG1Q9ULI3 1381 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 NFAT5O94916 1531 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 A0A0A6YYC8 382 aaPredicted RBP2.11□□□□□ -2.07
PDE4D-218ENST00000509368 IGHV4-28A0A0C4DH34 117 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 TRIM49BA6NDI0 452 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 LILRA5A6NI73 299 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 I3L1I5 382 aaPredicted RBP2.11□□□□□ -2.07
PDE4D-218ENST00000509368 TLR4O00206 839 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 MEIS2O14770 477 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 MAPK13O15264 365 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 GMFGO60234 142 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 MTRF1O75570 445 aaKnown RBP2.11□□□□□ -2.07
PDE4D-218ENST00000509368 DDNO94850 711 aaPredicted RBP2.11□□□□□ -2.07
PDE4D-218ENST00000509368 DIRAS3O95661 229 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 BAG3O95817 575 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 AK1P00568 194 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 H1F0P07305 194 aaKnown RBP2.11□□□□□ -2.07
PDE4D-218ENST00000509368 RALAP11233 206 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 SKILP12757 684 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 ARSBP15848 533 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 TNNI3P19429 210 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 STIP1P31948 543 aaKnown RBP2.11□□□□□ -2.07
PDE4D-218ENST00000509368 GNL1P36915 607 aaPredicted RBP2.11□□□□□ -2.07
PDE4D-218ENST00000509368 ALDH3B1P43353 468 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 MAGEA11P43364 429 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 PPP3CCP48454 512 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 FMO5P49326 533 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 PLCD1P51178 756 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 HNRNPFP52597 415 aaKnown RBP2.11□□□□□ -2.07
PDE4D-218ENST00000509368 CLDN20P56880 219 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 HUNKP57058 714 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 GSDMDP57764 484 aa2.11□□□□□ -2.07
PDE4D-218ENST00000509368 KRTAP10-7P60409 375 aaPredicted RBP2.11□□□□□ -2.07
PDE4D-218ENST00000509368 SRP54P61011 504 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms