RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 MED16Q9Y2X0 877 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 A0A087X1B8 175 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 C15orf38-AP3S2A0A0A6YYH1 394 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF879B4DU55 563 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 RECQL5O94762 991 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 LRATO95237 230 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PRAMEF12O95522 483 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 IFNGP01579 166 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 KDELR1P24390 212 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 GIFP27352 417 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CDC25BP30305 580 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 RPL22P35268 128 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TRIM23P36406 574 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CRATP43155 626 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 BDKRB1P46663 353 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 MTTPP55157 894 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 RAB25P57735 213 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SMIM11AP58511 58 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 DCDP81605 110 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 GUCY1A3Q02108 690 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 HSF2Q03933 536 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 KCNAB2Q13303 367 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLC29A2Q14542 456 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TCTE1Q5JU00 501 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLC2A7Q6PXP3 512 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ASCL5Q7RTU5 278 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLC41A1Q8IVJ1 513 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 FUKQ8N0W3 1084 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 FRMD1Q8N878 549 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF548Q8NEK5 533 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SNX33Q8WV41 574 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLC39A7Q92504 469 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLC9A6Q92581 669 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF514Q96K75 400 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 C9orf72Q96LT7 481 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TSGA13Q96PP4 275 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 UTP23Q9BRU9 249 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SPRTNQ9H040 489 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PCED1AQ9H1Q7 454 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 GBA3Q9H227 469 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CPNE5Q9HCH3 593 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PTPRHQ9HD43 1115 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 EQTNQ9NQ60 294 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PLCL2Q9UPR0 1127 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 IRAK3Q9Y616 596 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PTPRSQ13332 1948 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 NOTCH3Q9UM47 2321 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 COL6A6A6NMZ7 2263 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 NINQ8N4C6 2090 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 NSG1A0A0A6YYJ2 146 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 NPEPPSL1A6NEC2 478 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 FADS2P1A8MWK0 482 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CDC7O00311 574 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 STX16O14662 325 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLC30A4O14863 429 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 B4GAT1O43505 415 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 B4GALT2O60909 372 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SEC31AO94979 1220 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 HMGN1P05114 100 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 DBIP07108 87 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 FHP07954 510 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PF4V1P10720 104 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SRCP12931 536 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 NR2C1P13056 603 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 HOXD12P35452 270 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 NSG1P42857 185 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 DEFA1P59665 94 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 DEFA3P59666 94 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 RPS3AP61247 264 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ARF5P84085 180 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 OTUD4Q01804 1114 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 FCHO2Q0JRZ9 810 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 OVGP1Q12889 678 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 NR1I3Q14994 352 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 NR1D2Q14995 579 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 OASLQ15646 514 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLC18A3Q16572 532 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PARP6Q2NL67 630 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SAMD4BQ5PRF9 694 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 KLHDC10Q6PID8 442 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 SLC23A3Q6PIS1 610 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 DPY19L3Q6ZPD9 716 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ADGRG6Q86SQ4 1221 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 OAFQ86UD1 273 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PDZD3Q86UT5 571 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 LNX2Q8N448 690 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 NKAPQ8N5F7 415 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 KCT2Q8NC54 265 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CA5BP1Q8WTZ4 195 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PTCD2Q8WV60 388 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 DCAKDQ8WVC6 231 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 KAT5Q92993 513 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 PNPLA2Q96AD5 504 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF607Q96SK3 696 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 XKR8Q9H6D3 395 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM27Q9HBJ8 222 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 APOBEC3GQ9HC16 384 aaKnown RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 GLOD4Q9HC38 313 aa2.86□□□□□ -1.95
NEDD4-208ENST00000508342 CHMP1AQ9HD42 196 aaPredicted RBP2.86□□□□□ -1.95
NEDD4-208ENST00000508342 MKKSQ9NPJ1 570 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms