RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 ZNF253O75346 499 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 SEMA4FO95754 770 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 RAB40ALP0C0E4 278 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 PFKFB1P16118 471 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 ZNF17P17021 662 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 PSMB10P40306 273 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 SLC1A4P43007 532 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 KRTAP10-10P60014 251 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 RASGEF1BQ0VAM2 473 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 TSACCQ96A04 125 aaPredicted RBP2.23□□□□□ -2.05
CLOCK-207ENST00000508049 MOB3AQ96BX8 217 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 CFAP57Q96MR6 1250 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 NEDD4LQ96PU5 975 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 MAPKAP1Q9BPZ7 522 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 ZNF275Q9NSD4 429 aaPredicted RBP2.23□□□□□ -2.05
CLOCK-207ENST00000508049 DHRS4-AS1Q9P1J3 65 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 RNF150Q9ULK6 438 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 CLEC4EQ9ULY5 219 aa2.23□□□□□ -2.05
CLOCK-207ENST00000508049 RNF123Q5XPI4 1314 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 PGPEP1LA6NFU8 196 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 AP3D1O14617 1153 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 INPP4BO15327 924 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 SRPX2O60687 465 aaPredicted RBP2.22□□□□□ -2.05
CLOCK-207ENST00000508049 KBTBD11O94819 623 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 ZNF853P0CG23 659 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 CD1DP15813 335 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 GPX3P22352 226 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 NRIP1P48552 1158 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 ARF3P61204 181 aaPredicted RBP2.22□□□□□ -2.05
CLOCK-207ENST00000508049 ARF1P84077 181 aaKnown RBP2.22□□□□□ -2.05
CLOCK-207ENST00000508049 MPP1Q00013 466 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 NAAAQ02083 359 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 TIFABQ6ZNK6 161 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 MMS22LQ6ZRQ5 1243 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 MCM10Q7L590 875 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 NFAM1Q8NET5 270 aaPredicted RBP2.22□□□□□ -2.05
CLOCK-207ENST00000508049 OR4C15Q8NGM1 316 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 OR6T1Q8NGN1 323 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 OR10S1Q8NGN2 331 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 OR5M9Q8NGP3 310 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 ATL1Q8WXF7 558 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 ROBO4Q8WZ75 1007 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 PPP1R16AQ96I34 528 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 SLC2A11Q9BYW1 496 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 CDH20Q9HBT6 801 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 RSPH14Q9UHP6 348 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 CPSF3Q9UKF6 684 aaKnown RBP2.22□□□□□ -2.05
CLOCK-207ENST00000508049 RPS6KL1Q9Y6S9 549 aa2.22□□□□□ -2.05
CLOCK-207ENST00000508049 SALL1Q9NSC2 1324 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 A0A1W2PQ09 198 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 RSPH10B2B2RC85 870 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 TCP11X1B4DZS4 312 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 RPS6KA5O75582 802 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 RSPH10BP0C881 870 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 GIFP27352 417 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 LHX1P48742 406 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 NONOQ15233 471 aaKnown RBP eCLIP2.21□□□□□ -2.06
CLOCK-207ENST00000508049 SNAPC1Q16533 368 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 KNOP1Q1ED39 458 aaKnown RBP2.21□□□□□ -2.06
CLOCK-207ENST00000508049 C15orf59Q2T9L4 293 aaPredicted RBP2.21□□□□□ -2.06
CLOCK-207ENST00000508049 CBWD6Q4V339 395 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 CBWD3Q5JTY5 395 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 RASGEF1AQ8N9B8 481 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 CASP10Q92851 521 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 RANBP9Q96S59 729 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 EBF4Q9BQW3 602 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 DEFB126Q9BYW3 111 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 SDCBP2Q9H190 292 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 WDR41Q9HAD4 459 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 GSN-AS1Q9NRJ2 163 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 PRMT7Q9NVM4 692 aaPredicted RBP2.21□□□□□ -2.06
CLOCK-207ENST00000508049 IL36AQ9UHA7 158 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 ZNF346Q9UL40 294 aaKnown RBP2.21□□□□□ -2.06
CLOCK-207ENST00000508049 PLEKHA6Q9Y2H5 1048 aa2.21□□□□□ -2.06
CLOCK-207ENST00000508049 A0A1W2PPK0 400 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 TNFSF11O14788 317 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 PTP4A3O75365 173 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 SAGP10523 405 aaPredicted RBP2.2□□□□□ -2.06
CLOCK-207ENST00000508049 ZNF133P52736 654 aaPredicted RBP2.2□□□□□ -2.06
CLOCK-207ENST00000508049 IST1P53990 364 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 NPTX1Q15818 432 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 PLEKHS1Q5SXH7 462 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 PRSS55Q6UWB4 352 aaPredicted RBP2.2□□□□□ -2.06
CLOCK-207ENST00000508049 NAXDQ8IW45 347 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 RYBPQ8N488 228 aaPredicted RBP2.2□□□□□ -2.06
CLOCK-207ENST00000508049 NXPE2Q96DL1 559 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 IL12RB2Q99665 862 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 GOLPH3LQ9H4A5 285 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 RAVER2Q9HCJ3 691 aaKnown RBP2.2□□□□□ -2.06
CLOCK-207ENST00000508049 FBXL4Q9UKA2 621 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 PILRBQ9UKJ0 227 aa2.2□□□□□ -2.06
CLOCK-207ENST00000508049 MRPL11Q9Y3B7 192 aaKnown RBP2.2□□□□□ -2.06
CLOCK-207ENST00000508049 SPATA31D1Q6ZQQ2 1576 aa2.19□□□□□ -2.06
CLOCK-207ENST00000508049 NKX6-3A6NJ46 265 aa2.19□□□□□ -2.06
CLOCK-207ENST00000508049 J3KRW8 73 aa2.19□□□□□ -2.06
CLOCK-207ENST00000508049 SLC33A1O00400 549 aaPredicted RBP2.19□□□□□ -2.06
CLOCK-207ENST00000508049 GJB3O75712 270 aa2.19□□□□□ -2.06
CLOCK-207ENST00000508049 PIGRP01833 764 aa2.19□□□□□ -2.06
CLOCK-207ENST00000508049 LINGO3P0C6S8 592 aa2.19□□□□□ -2.06
CLOCK-207ENST00000508049 ODC1P11926 461 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms