RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 ANKRD11Q6UB99 2663 aaPredicted RBP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 NBEAQ8NFP9 2946 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 SMG1Q96Q15 3661 aaKnown RBP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 CCDC187A0A096LP49 1063 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 MED19A0JLT2 244 aaPredicted RBP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 LRIT2A6NDA9 550 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 PLD2O14939 933 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 SRPX2O60687 465 aaPredicted RBP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 CNOT3O75175 753 aaKnown RBP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 SCELO95171 688 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 CLDN9O95484 217 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 PRR35P0CG20 571 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 TAC1P20366 129 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 BGNP21810 368 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 CMPK1P30085 196 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 HPDP32754 393 aaPredicted RBP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 HNF4AP41235 474 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 PIK3CGP48736 1102 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 CCR8P51685 355 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 TBL3Q12788 808 aaKnown RBP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 COL9A2Q14055 689 aaPredicted RBP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 RCN2Q14257 317 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 SLBPQ14493 270 aaKnown RBP eCLIP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 IL11RAQ14626 422 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 CHI3L2Q15782 390 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 XKR7Q5GH72 579 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 SNAP47Q5SQN1 464 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 KANK2Q63ZY3 851 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 LCN10Q6JVE6 187 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 CGB2Q6NT52 195 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 TMIGD1Q6UXZ0 262 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF793Q6ZN11 406 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 PRSS41Q7RTY9 318 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 TRIM46Q7Z4K8 759 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 MCATQ8IVS2 390 aaKnown RBP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 GALNT15Q8N3T1 639 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 RAB42Q8N4Z0 105 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF781Q8N8C0 355 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 AMER3Q8N944 861 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 MFSD9Q8NBP5 474 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 KCT2Q8NC54 265 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 ANKK1Q8NFD2 765 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 OR2T11Q8NH01 316 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 HUS1BQ8NHY5 278 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 RAB3IL1Q8TBN0 382 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 NT5CQ8TCD5 201 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 CKAP2Q8WWK9 683 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 MS4A6EQ96DS6 147 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 SEC16BQ96JE7 1060 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 CNDP1Q96KN2 507 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 FCRL1Q96LA6 429 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 QRFPRQ96P65 431 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 GBP5Q96PP8 586 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 DEPDC7Q96QD5 511 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 OR6C1Q96RD1 312 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 TRMOQ9BU70 441 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 EFCAB11Q9BUY7 163 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 DDA1Q9BW61 102 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 CAPS2Q9BXY5 557 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 SPRTNQ9H040 489 aaPredicted RBP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 KLHL31Q9H511 634 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 CCDC134Q9H6E4 229 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 PDE7BQ9NP56 450 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 SLCO1B3Q9NPD5 702 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 PSD3Q9NYI0 1048 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 DKK4Q9UBT3 224 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 TRPS1Q9UHF7 1281 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 RUVBL1Q9Y265 456 aaKnown RBP4.71□□□□□ -1.66
LMNB1-208ENST00000504788 MSRB2Q9Y3D2 182 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 LOXL2Q9Y4K0 774 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 NEUROG3Q9Y4Z2 214 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 PCDHB3Q9Y5E6 796 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 PCDHGA7Q9Y5G6 932 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 USP24Q9UPU5 2620 aa4.71□□□□□ -1.66
LMNB1-208ENST00000504788 A0A0J9YVX5 310 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 GOLGA6L10A6NI86 522 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 EFCAB7A8K855 629 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 MAGEB17A8MXT2 336 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 FOXE1O00358 373 aaPredicted RBP4.7□□□□□ -1.66
LMNB1-208ENST00000504788 NVLO15381 856 aaKnown RBP4.7□□□□□ -1.66
LMNB1-208ENST00000504788 ZW10O43264 779 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF749O43361 778 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 KATNA1O75449 491 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 CLEC3AO75596 197 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 RASSF9O75901 435 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 CCNDBP1O95273 360 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 B3GALT4O96024 378 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 OTCP00480 354 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 SERPINE1P05121 402 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 PRPH2P23942 346 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 SERPINB3P29508 390 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 SERPINB5P36952 375 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 PIK3CBP42338 1070 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 NEK2P51955 445 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 PKNOX1P55347 436 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 NAA20P61599 178 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 RPS15AP62244 130 aaKnown RBP4.7□□□□□ -1.66
LMNB1-208ENST00000504788 IRF8Q02556 426 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 GPS2Q13227 327 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms