RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 RGS1Q08116 209 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 CDC16Q13042 620 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 PWP1Q13610 501 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 ATP1A4Q13733 1029 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 DSG2Q14126 1118 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 FAM153CQ494X1 144 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 CPZQ66K79 652 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 TMEM214Q6NUQ4 689 aaKnown RBP12.16□□□□□ -0.46
HSPG2-213ENST00000498495 PRSS58Q8IYP2 241 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 ARHGEF39Q8N4T4 335 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 EIF1ADQ8N9N8 165 aaKnown RBP12.16□□□□□ -0.46
HSPG2-213ENST00000498495 SNX31Q8N9S9 440 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 PDPRQ8NCN5 879 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 ZNF740Q8NDX6 193 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 OR9A4Q8NGU2 314 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 RHEBL1Q8TAI7 183 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 ZCCHC10Q8TBK6 192 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 VPS50Q96JG6 964 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 ATOH8Q96SQ7 321 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 TMEM79Q9BSE2 394 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 CD244Q9BZW8 370 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 SPNS1Q9H2V7 528 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 ANKHQ9HCJ1 492 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 MKKSQ9NPJ1 570 aaPredicted RBP12.16□□□□□ -0.46
HSPG2-213ENST00000498495 SEMA3GQ9NS98 782 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 P4HTMQ9NXG6 502 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 GPRC5BQ9NZH0 403 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 NUDT4Q9NZJ9 180 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 ZFP69BQ9UJL9 534 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 MRPS2Q9Y399 296 aaKnown RBP12.16□□□□□ -0.46
HSPG2-213ENST00000498495 MAP4K5Q9Y4K4 846 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 NBEAQ8NFP9 2946 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 MGAQ8IWI9 3026 aa12.16□□□□□ -0.46
HSPG2-213ENST00000498495 ITPR1Q14643 2758 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 CCDC88CQ9P219 2028 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 IGLV3-12A0A075B6K2 115 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 URADA6NGE7 173 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 AGPSO00116 658 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 UBXN8O00124 270 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 FFAR3O14843 346 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 GPR42O15529 346 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 NSA2O95478 260 aaKnown RBP12.15□□□□□ -0.46
HSPG2-213ENST00000498495 ABHD2P08910 425 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 SNRPAP09012 282 aaKnown RBP12.15□□□□□ -0.46
HSPG2-213ENST00000498495 REEP5Q00765 189 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 KLC1Q07866 573 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 SLC29A2Q14542 456 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 RBBP7Q16576 425 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 ATG9BQ674R7 924 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 TCTN3Q6NUS6 607 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 SLCO4C1Q6ZQN7 724 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 PPP1R32Q7Z5V6 425 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 MRGPREQ86SM8 312 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 ZNF605Q86T29 641 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 TMEM151BQ8IW70 566 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 CENPLQ8N0S6 344 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-213ENST00000498495 KRT78Q8N1N4 520 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 TRPV3Q8NET8 790 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 DCAKDQ8WVC6 231 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 MOCOSQ96EN8 888 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 CCDC77Q9BR77 488 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 CRB3Q9BUF7 120 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 SLC25A23Q9BV35 468 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 G3BP2Q9UN86 482 aaKnown RBP12.15□□□□□ -0.46
HSPG2-213ENST00000498495 HEMK1Q9Y5R4 338 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-213ENST00000498495 SLC22A7Q9Y694 548 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 LOC400499M0QZD8 3231 aa12.15□□□□□ -0.46
HSPG2-213ENST00000498495 FER1L5A0AVI2 2057 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 A6NL46 340 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 TRIM49D1C9J1S8 452 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 SGK494L7N484 410 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 ZNF500O60304 480 aaPredicted RBP12.14□□□□□ -0.47
HSPG2-213ENST00000498495 HEXBP07686 556 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 RBP1P09455 135 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 GFAPP14136 432 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 IL1RNP18510 177 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 EMP2P54851 167 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 SKP1P63208 163 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 MAT1AQ00266 395 aaKnown RBP12.14□□□□□ -0.47
HSPG2-213ENST00000498495 SLBPQ14493 270 aaKnown RBP eCLIP12.14□□□□□ -0.47
HSPG2-213ENST00000498495 HERC3Q15034 1050 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 PDK4Q16654 411 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 SYT16Q17RD7 645 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 LACTB2Q53H82 288 aaPredicted RBP12.14□□□□□ -0.47
HSPG2-213ENST00000498495 XKR6Q5GH73 641 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 DCAF10Q5QP82 559 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 TMIGD1Q6UXZ0 262 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 LAPTM4BQ86VI4 370 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 PTRH1Q86Y79 214 aaKnown RBP12.14□□□□□ -0.47
HSPG2-213ENST00000498495 GSPT2Q8IYD1 628 aaKnown RBP12.14□□□□□ -0.47
HSPG2-213ENST00000498495 PLD6Q8N2A8 252 aaKnown RBP12.14□□□□□ -0.47
HSPG2-213ENST00000498495 AMER3Q8N944 861 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 ANKRD53Q8N9V6 530 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 CLEC1AQ8NC01 280 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 OR51Q1Q8NH59 317 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 NT5CQ8TCD5 201 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 TXLNGYQ9BZA5 131 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 TGIF2Q9GZN2 237 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 NT5DC2Q9H857 520 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms