RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 SYVN1Q86TM6 617 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 CYP4X1Q8N118 509 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 TEX9Q8N6V9 391 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 PTGR2Q8N8N7 351 aaPredicted RBP9.35□□□□□ -0.91
CALD1-223ENST00000496024 OR9A4Q8NGU2 314 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 SNRNP27Q8WVK2 155 aaKnown RBP9.35□□□□□ -0.91
CALD1-223ENST00000496024 CCT6BQ92526 530 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 THAP11Q96EK4 314 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 C17orf62Q9BQA9 187 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 ARHGAP9Q9BRR9 750 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 DRC3Q9H069 523 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 SOX17Q9H6I2 414 aaPredicted RBP9.35□□□□□ -0.91
CALD1-223ENST00000496024 ZNF304Q9HCX3 659 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 GEMIN8Q9NWZ8 242 aaKnown RBP9.35□□□□□ -0.91
CALD1-223ENST00000496024 CTSFQ9UBX1 484 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 FETUBQ9UGM5 382 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 CDC14AQ9UNH5 594 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 PADI2Q9Y2J8 665 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 ANGPTL3Q9Y5C1 460 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 PCDHGA6Q9Y5G7 932 aa9.35□□□□□ -0.91
CALD1-223ENST00000496024 SGK494L7N484 410 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 TK2O00142 265 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 FOXS1O43638 330 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 PRAMEF4O60810 478 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 SIX3O95343 332 aaPredicted RBP9.34□□□□□ -0.91
CALD1-223ENST00000496024 B3GALT4O96024 378 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 IL1RNP18510 177 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 EEF1DP29692 281 aaKnown RBP9.34□□□□□ -0.91
CALD1-223ENST00000496024 ARL1P40616 181 aaPredicted RBP9.34□□□□□ -0.91
CALD1-223ENST00000496024 FOLR3P41439 243 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 SCTRP47872 440 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 ALDH18A1P54886 795 aaKnown RBP9.34□□□□□ -0.91
CALD1-223ENST00000496024 RHDQ02161 417 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 RGS1Q08116 209 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 CHIT1Q13231 466 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 DOC2AQ14183 400 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 SETDB1Q15047 1291 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 SYT16Q17RD7 645 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 GARNL3Q5VVW2 1013 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 PRAMEF9Q5VWM5 478 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 ATG9BQ674R7 924 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 PRMT9Q6P2P2 845 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 MYLK4Q86YV6 388 aaPredicted RBP9.34□□□□□ -0.91
CALD1-223ENST00000496024 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.34□□□□□ -0.91
CALD1-223ENST00000496024 KRT78Q8N1N4 520 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 ANKRD53Q8N9V6 530 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 UBTD2Q8WUN7 234 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 ZBTB9Q96C00 473 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 TM4SF19Q96DZ7 209 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 MRPL57Q9BQC6 102 aaKnown RBP9.34□□□□□ -0.91
CALD1-223ENST00000496024 CAPS2Q9BXY5 557 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 MRPL46Q9H2W6 279 aaKnown RBP9.34□□□□□ -0.91
CALD1-223ENST00000496024 ANKHQ9HCJ1 492 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 GPRC5BQ9NZH0 403 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 TMEM216Q9P0N5 145 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 TRPC4Q9UBN4 977 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 ZFP69BQ9UJL9 534 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 POLHQ9Y253 713 aa9.34□□□□□ -0.91
CALD1-223ENST00000496024 CCDC189A1A4V9 331 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 ZNF860A6NHJ4 632 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 ARGFXA6NJG6 315 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 PRPF4O43172 522 aaKnown RBP eCLIP9.33□□□□□ -0.92
CALD1-223ENST00000496024 RDH16O75452 317 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 KLF7O75840 302 aaPredicted RBP9.33□□□□□ -0.92
CALD1-223ENST00000496024 FAM87AP0C7U9 286 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 ZNF888P0CJ79 500 aaPredicted RBP9.33□□□□□ -0.92
CALD1-223ENST00000496024 PCNAP12004 261 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 EPB42P16452 691 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 EPORP19235 508 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 CXCR2P25025 360 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 AHRP35869 848 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 AVPR1BP47901 424 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 EMP3P54852 163 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 RAB8AP61006 207 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 MAT1AQ00266 395 aaKnown RBP9.33□□□□□ -0.92
CALD1-223ENST00000496024 OCA2Q04671 838 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 CHAF1BQ13112 559 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 FAM53BQ14153 422 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 LY6DQ14210 128 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 NKG7Q16617 165 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 UGT8Q16880 541 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 LINC00303Q3SY05 128 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 DEFB134Q4QY38 66 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 VWA2Q5GFL6 755 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 TOR1AIP1Q5JTV8 583 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 ADNP2Q6IQ32 1131 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 TMEM214Q6NUQ4 689 aaKnown RBP9.33□□□□□ -0.92
CALD1-223ENST00000496024 MRPL14Q6P1L8 145 aaKnown RBP9.33□□□□□ -0.92
CALD1-223ENST00000496024 BORAQ6PGQ7 559 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 TMIGD1Q6UXZ0 262 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 SHISA5Q8N114 240 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 ARHGEF39Q8N4T4 335 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 TRPV3Q8NET8 790 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 MZB1Q8WU39 189 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 TTC9Q92623 222 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 CAVIN3Q969G5 261 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 FKBP10Q96AY3 582 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 CATSPER2Q96P56 530 aa9.33□□□□□ -0.92
CALD1-223ENST00000496024 BBC3Q96PG8 261 aaPredicted RBP9.33□□□□□ -0.92
CALD1-223ENST00000496024 UBL7Q96S82 380 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms