RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 A0A1W2PR77 199 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 TSPAN11A1L157 253 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 C3orf70A6NLC5 250 aaPredicted RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 SMIM23A6NLE4 172 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 A8MX80 341 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 TARM1B6A8C7 271 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 PSMD11O00231 422 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 RNF103O00237 685 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 CACNB4O00305 520 aaPredicted RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 SYT5O00445 386 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 TRAFD1O14545 582 aaPredicted RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 RASGRF2O14827 1237 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 AREL1O15033 823 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 ANXA9O76027 345 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 KCNK5O95279 499 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 PGLSO95336 258 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 TRIM16O95361 564 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 AGTP01019 485 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 HLA-DQB2P05538 268 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 DMDP11532 3685 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 CTSEP14091 401 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 EZRP15311 586 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 ZNF30P17039 623 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 CTPS1P17812 591 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 MPGP29372 298 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 CD86P42081 329 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 RGRP47804 291 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 FNTAP49354 379 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 PEX5P50542 639 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 ARFIP2P53365 341 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 ITGA8P53708 1063 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 DRG2P55039 364 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 CLDN2P57739 230 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 EIF3EP60228 445 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 HNRNPKP61978 463 aaKnown RBP eCLIP4.42□□□□□ -1.7
RBM39-240ENST00000495293 IFI35P80217 286 aaPredicted RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 MPP1Q00013 466 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 CDK18Q07002 472 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 SLC10A2Q12908 348 aaPredicted RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 IFT88Q13099 833 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 PEX6Q13608 980 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 TRIP6Q15654 476 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 FAM153CQ494X1 144 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 C3orf38Q5JPI3 329 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 DEPDC1Q5TB30 811 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 FAXCQ5TGI0 409 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 MZT2BQ6NZ67 158 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 CFAP161Q6P656 301 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 KYAT3Q6YP21 454 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 BBS12Q6ZW61 710 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 TRMT10CQ7L0Y3 403 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 DPPA4Q7L190 304 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 GSTA5Q7RTV2 222 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 PARGQ86W56 976 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 CCDC25Q86WR0 208 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 NAXDQ8IW45 347 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 MPP5Q8N3R9 675 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 GALNT15Q8N3T1 639 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 PGBD5Q8N414 524 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 DEFB124Q8NES8 71 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 LPCAT1Q8NF37 534 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 TMEM171Q8WVE6 324 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 KRT35Q92764 455 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 NMD3Q96D46 503 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 ECHDC3Q96DC8 303 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 NUS1Q96E22 293 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 SCRN2Q96FV2 425 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 CHMP6Q96FZ7 201 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 IL12RB2Q99665 862 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 MLPHQ9BV36 600 aaPredicted RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 PTDSS2Q9BVG9 487 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 SORBS1Q9BX66 1292 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 FSD1LQ9BXM9 530 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 QTRT1Q9BXR0 403 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 TDRD1Q9BXT4 1180 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 ROPN1BQ9BZX4 212 aaPredicted RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 SLC25A51Q9H1U9 297 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 EBF2Q9HAK2 575 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 ROPN1Q9HAT0 212 aaPredicted RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 SMURF2Q9HAU4 748 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 FZD3Q9NPG1 666 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 SACM1LQ9NTJ5 587 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 SERTAD4Q9NUC0 356 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 INTS9Q9NV88 658 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 PKD2L2Q9NZM6 624 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 SPASTQ9UBP0 616 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 ASIC3Q9UHC3 531 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 FAM153AQ9UHL3 310 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 MOSPD1Q9UJG1 213 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 SLC39A10Q9ULF5 831 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 CHKBQ9Y259 395 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 ITM2BQ9Y287 266 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 BTBD3Q9Y2F9 522 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 AAR2Q9Y312 384 aaKnown RBP4.42□□□□□ -1.7
RBM39-240ENST00000495293 SNX24Q9Y343 169 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 SDK1Q7Z5N4 2213 aa4.42□□□□□ -1.7
RBM39-240ENST00000495293 PTPRZ1P23471 2315 aaPredicted RBP4.41□□□□□ -1.7
RBM39-240ENST00000495293 PLXNA2O75051 1894 aa4.41□□□□□ -1.7
RBM39-240ENST00000495293 ANKRD36A6QL64 1941 aa4.41□□□□□ -1.7
RBM39-240ENST00000495293 A0A087WWL8 130 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms