RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 MAN2B2Q9Y2E5 1009 aa9.99□□□□□ -0.81
SAMM50-206ENST00000494795 PCDHGA11Q9Y5H2 935 aa9.99□□□□□ -0.81
SAMM50-206ENST00000494795 CCDC88CQ9P219 2028 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 C1QTNF3-AMACRE9PGA6 284 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 H3BSA7 217 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 VILLO15195 856 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 NME6O75414 186 aaPredicted RBP9.98□□□□□ -0.81
SAMM50-206ENST00000494795 CLPTM1O96005 669 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 CST1P01037 141 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 C1GALT1C1LP0DN25 315 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 LTBRP36941 435 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 SLC19A1P41440 591 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 HBA1P69905 142 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 SLC36A3Q495N2 470 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 MED27Q6P2C8 311 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 RBM44Q6ZP01 1051 aaKnown RBP9.98□□□□□ -0.81
SAMM50-206ENST00000494795 PROSER1Q86XN7 944 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 NAGSQ8N159 534 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 ZNF786Q8N393 782 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 ZFP28Q8NHY6 868 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 SLC5A11Q8WWX8 675 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 F2RL3Q96RI0 385 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 INSM2Q96T92 566 aaPredicted RBP9.98□□□□□ -0.81
SAMM50-206ENST00000494795 DUSP26Q9BV47 211 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 TRMT61BQ9BVS5 477 aaKnown RBP9.98□□□□□ -0.81
SAMM50-206ENST00000494795 OSBPL11Q9BXB4 747 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 DMRT3Q9NQL9 472 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 CKAP5Q14008 2032 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 IGKV1-8A0A0C4DH67 115 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 A0A1W2PPV9 198 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 A0A1W2PQF6 199 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 A0A1W2PQU0 124 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 SCAMP2O15127 329 aaKnown RBP9.98□□□□□ -0.81
SAMM50-206ENST00000494795 AP1G1O43747 822 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 GCM2O75603 506 aaPredicted RBP9.98□□□□□ -0.81
SAMM50-206ENST00000494795 RPS9P46781 194 aaKnown RBP9.98□□□□□ -0.81
SAMM50-206ENST00000494795 TAS2R50P59544 299 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 PIGFQ07326 219 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 APOFQ13790 326 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 GTF2H3Q13889 308 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 NXPE4Q6UWF7 544 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 ANGPTL8Q6UXH0 198 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 CEP68Q76N32 757 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 ADGRF3Q8IZF5 1079 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 IL17RCQ8NAC3 791 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 TP53I13Q8NBR0 393 aaPredicted RBP9.98□□□□□ -0.81
SAMM50-206ENST00000494795 MRPL38Q96DV4 380 aaKnown RBP9.98□□□□□ -0.81
SAMM50-206ENST00000494795 MUS81Q96NY9 551 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 ANKRD60Q9BZ19 345 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 AICDAQ9GZX7 198 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 GORASP2Q9H8Y8 452 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 PRDM8Q9NQV8 689 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 DCAF13Q9NV06 445 aaKnown RBP9.98□□□□□ -0.81
SAMM50-206ENST00000494795 IMP3Q9NV31 184 aaKnown RBP9.98□□□□□ -0.81
SAMM50-206ENST00000494795 CLDND1Q9NY35 253 aa9.98□□□□□ -0.81
SAMM50-206ENST00000494795 DYTNA2CJ06 578 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 TMEM229AB2RXF0 380 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 H3BQ06 376 aaPredicted RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 GPR37L1O60883 481 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 C6orf47O95873 294 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 APODP05090 189 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 PRPS1L1P21108 318 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 RPS26P62854 115 aaKnown RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 IRX1P78414 480 aaPredicted RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 CTBSQ01459 385 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 CSTF3Q12996 717 aaKnown RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 DUOXA1Q1HG43 343 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 ITPRIPL2Q3MIP1 535 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 INTS11Q5TA45 600 aaKnown RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 KRT80Q6KB66 452 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 SPESP1Q6UW49 350 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 OLIG3Q7RTU3 272 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 ZZZ3Q8IYH5 903 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 TBC1D21Q8IYX1 336 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 HM13Q8TCT9 377 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 RSPO3Q9BXY4 272 aaPredicted RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 EPHX3Q9H6B9 360 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 CCDC177Q9NQR7 707 aaPredicted RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 AASDHPPTQ9NRN7 309 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 RAD18Q9NS91 495 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 SCN3AQ9NY46 2000 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 A0A1W2PS29 197 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 C4orf51C9J302 202 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 RAP2AP10114 183 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 ETFAP13804 333 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 PCSK6P29122 969 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 EPHA2P29317 976 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 IGFALSP35858 605 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 VLDLRP98155 873 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 CHRNB3Q05901 458 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 CAMK2GQ13555 558 aaPredicted RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 SMU1Q2TAY7 513 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 AASDHQ4L235 1098 aaPredicted RBP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 RD3Q7Z3Z2 195 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 GALNT5Q7Z7M9 940 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 PDZD3Q86UT5 571 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 TMEM132CQ8N3T6 1108 aa9.97□□□□□ -0.81
SAMM50-206ENST00000494795 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.97□□□□□ -0.81
SAMM50-206ENST00000494795 ATL1Q8WXF7 558 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms