RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 KRT78Q8N1N4 520 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 KCT2Q8NC54 265 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 ADAMTS17Q8TE56 1095 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.15■□□□□ 0.023e-7■□□□□ 10.3
LIME1-209ENST00000494776 MIEF2Q96C03 454 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 MTBPQ96DY7 904 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 TM4SF19Q96DZ7 209 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 IP6K3Q96PC2 410 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 SARGQ9BW04 601 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 CD244Q9BZW8 370 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 SLC26A1Q9H2B4 701 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 ANKZF1Q9H8Y5 726 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 ANKHQ9HCJ1 492 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 GEMIN8Q9NWZ8 242 aaKnown RBP15.15■□□□□ 0.02
LIME1-209ENST00000494776 ZFP69BQ9UJL9 534 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 ANGPTL3Q9Y5C1 460 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 LOC400499M0QZD8 3231 aa15.15■□□□□ 0.02
LIME1-209ENST00000494776 FOXS1O43638 330 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 RFPL1O75677 317 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 RBP1P09455 135 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 AHRP35869 848 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 SCTRP47872 440 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 AGTR2P50052 363 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 RRADP55042 308 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 PWP1Q13610 501 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 ATP1A4Q13733 1029 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 DSG2Q14126 1118 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 SLBPQ14493 270 aaKnown RBP eCLIP15.14■□□□□ 0.01
LIME1-209ENST00000494776 PFKFB4Q16877 469 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 TSNAXIP1Q2TAA8 658 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 XKR6Q5GH73 641 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 TMEM214Q6NUQ4 689 aaKnown RBP15.14■□□□□ 0.01
LIME1-209ENST00000494776 ADGRD1Q6QNK2 874 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 SLCO4C1Q6ZQN7 724 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 LRRC70Q7Z2Q7 622 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 PLD6Q8N2A8 252 aaKnown RBP15.14■□□□□ 0.01
LIME1-209ENST00000494776 TRPV3Q8NET8 790 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 OR9A4Q8NGU2 314 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 STT3BQ8TCJ2 826 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 ISL2Q96A47 359 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 ING2Q9H160 280 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 SPNS1Q9H2V7 528 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 CPSF2Q9P2I0 782 aaKnown RBP15.14■□□□□ 0.01
LIME1-209ENST00000494776 PSMC3IPQ9P2W1 217 aaPredicted RBP15.14■□□□□ 0.01
LIME1-209ENST00000494776 OPTCQ9UBM4 332 aa15.14■□□□□ 0.01
LIME1-209ENST00000494776 MRPS2Q9Y399 296 aaKnown RBP15.14■□□□□ 0.01
LIME1-209ENST00000494776 URADA6NGE7 173 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 MKRN2OSH3BPM6 223 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 MAP2K7O14733 419 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 FFAR3O14843 346 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 GPR42O15529 346 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 NSA2O95478 260 aaKnown RBP15.13■□□□□ 0.01
LIME1-209ENST00000494776 IGHEP01854 428 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 UMODP07911 640 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 ZGLP1P0C6A0 271 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 COL6A2P12110 1019 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 IL1RNP18510 177 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 MAGEA12P43365 314 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 CCL11P51671 97 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 IRF8Q02556 426 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 CHAF1BQ13112 559 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 HERC3Q15034 1050 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 HIST2H2ACQ16777 129 aaPredicted RBP15.13■□□□□ 0.01
LIME1-209ENST00000494776 VWA2Q5GFL6 755 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 HIST2H2AA3Q6FI13 130 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 TMIGD1Q6UXZ0 262 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 MED25Q71SY5 747 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 ABHD13Q7L211 337 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 MRGPREQ86SM8 312 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 APLFQ8IW19 511 aaPredicted RBP15.13■□□□□ 0.01
LIME1-209ENST00000494776 ARHGEF39Q8N4T4 335 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 TMEM102Q8N9M5 508 aaPredicted RBP15.13■□□□□ 0.01
LIME1-209ENST00000494776 TTLQ8NG68 377 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 C9orf43Q8TAL5 461 aaPredicted RBP15.13■□□□□ 0.01
LIME1-209ENST00000494776 CCT6BQ92526 530 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 MOCOSQ96EN8 888 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 SPSB2Q99619 263 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 CRB3Q9BUF7 120 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 SEMA4CQ9C0C4 833 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 MKKSQ9NPJ1 570 aaPredicted RBP15.13■□□□□ 0.01
LIME1-209ENST00000494776 SEMA3GQ9NS98 782 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 ZNF358Q9NW07 568 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 BAHCC1Q9P281 2608 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 TUBD1Q9UJT1 453 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 MAP4K5Q9Y4K4 846 aa15.13■□□□□ 0.01
LIME1-209ENST00000494776 MDC1Q14676 2089 aaKnown RBP15.13■□□□□ 0.01
LIME1-209ENST00000494776 SMG1Q96Q15 3661 aaKnown RBP15.12■□□□□ 0.01
LIME1-209ENST00000494776 ANKDD1BA6NHY2 528 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 VSTM2BA6NLU5 285 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 H0YIG0 161 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 K7EPI3 171 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 SGK494L7N484 410 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 DNAJB5O75953 348 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 MMP11P24347 488 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 GCAP28676 217 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 HNF4AP41235 474 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 ALDH18A1P54886 795 aaKnown RBP15.12■□□□□ 0.01
LIME1-209ENST00000494776 SKP1P63208 163 aa15.12■□□□□ 0.01
LIME1-209ENST00000494776 MAT1AQ00266 395 aaKnown RBP15.12■□□□□ 0.01
LIME1-209ENST00000494776 KLC1Q07866 573 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms