RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PRAMEF2O60811 474 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 MLYCDO95822 493 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 JAK1P23458 1154 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 GABRB3P28472 473 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 CDKN2DP55273 166 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 MAT1AQ00266 395 aaKnown RBP11.77□□□□□ -0.53
COL6A1-205ENST00000492851 TIAL1Q01085 375 aaKnown RBP eCLIP11.77□□□□□ -0.53
COL6A1-205ENST00000492851 RBPJQ06330 500 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 ZNF33BQ06732 778 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 ACTN3Q08043 901 aaPredicted RBP11.77□□□□□ -0.53
COL6A1-205ENST00000492851 CSHL1Q14406 222 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 SYT16Q17RD7 645 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 BTBD16Q32M84 506 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 TEDDM1Q5T9Z0 273 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 HECTD2Q5U5R9 776 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 ZNF324BQ6AW86 544 aaPredicted RBP11.77□□□□□ -0.53
COL6A1-205ENST00000492851 HIBCHQ6NVY1 386 aaPredicted RBP11.77□□□□□ -0.53
COL6A1-205ENST00000492851 H3F3CQ6NXT2 135 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 MTFR2Q6P444 385 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 SLC26A11Q86WA9 606 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 HORMAD2Q8N7B1 307 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 PLPP5Q8NEB5 264 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 OR56A3Q8NH54 315 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 M1APQ8TC57 530 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 NR4A3Q92570 626 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 MESP1Q9BRJ9 268 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 DDX47Q9H0S4 455 aaKnown RBP11.77□□□□□ -0.53
COL6A1-205ENST00000492851 RUBCNLQ9H714 662 aa11.77□□□□□ -0.53
COL6A1-205ENST00000492851 ANKRD12Q6UB98 2062 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 TRBC2A0A5B9 178 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 FEZF1A0PJY2 475 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 SGK494L7N484 410 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 OR1F1O43749 312 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 LCMT2O60294 686 aaKnown RBP11.76□□□□□ -0.53
COL6A1-205ENST00000492851 SNRNP200O75643 2136 aaKnown RBP11.76□□□□□ -0.53
COL6A1-205ENST00000492851 CLDN1O95832 211 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 WDPCPO95876 746 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 F7P08709 466 aaPredicted RBP11.76□□□□□ -0.53
COL6A1-205ENST00000492851 RNF224P0DH78 156 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 ITGAMP11215 1152 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 CDH1P12830 882 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 IL1RNP18510 177 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 AHRP35869 848 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 PAFAH1B1P43034 410 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 HNMTP50135 292 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 ARL4CP56559 192 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 DR1Q01658 176 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 RGS1Q08116 209 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 ESPL1Q14674 2120 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 NSDHLQ15738 373 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 MEP1AQ16819 746 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 RBM20Q5T481 1227 aaKnown RBP11.76□□□□□ -0.53
COL6A1-205ENST00000492851 ABHD13Q7L211 337 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 NKAPQ8N5F7 415 aaKnown RBP11.76□□□□□ -0.53
COL6A1-205ENST00000492851 KCT2Q8NC54 265 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 TRPV3Q8NET8 790 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 RELTQ969Z4 430 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 FBXL8Q96CD0 374 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 LPAR4Q99677 370 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 KCNK13Q9HB14 408 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 MMP25Q9NPA2 562 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 NSMCE4AQ9NXX6 385 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 RNF14Q9UBS8 474 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 NAALAD2Q9Y3Q0 740 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 NUP210LQ5VU65 1888 aa11.76□□□□□ -0.53
COL6A1-205ENST00000492851 MAGEB17A8MXT2 336 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 CCDC188H7C350 402 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 NDUFS4O43181 175 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 SEC24DO94855 1032 aaPredicted RBP11.75□□□□□ -0.53
COL6A1-205ENST00000492851 TSPAN12O95859 305 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 ALOX12P18054 663 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 IVDP26440 423 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 ELK3P41970 407 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 TAS2R50P59544 299 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 ZRSR2Q15696 482 aaKnown RBP11.75□□□□□ -0.53
COL6A1-205ENST00000492851 PHKG1Q16816 387 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 MSS51Q4VC12 460 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 ACER2Q5QJU3 275 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 TMEM207Q6UWW9 146 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 GFRALQ6UXV0 394 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 ANKRD37Q7Z713 158 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 LGI4Q8N135 537 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 AFAP1L2Q8N4X5 818 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 SLC5A8Q8N695 610 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 BBOF1Q8ND07 529 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 NT5CQ8TCD5 201 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 SLC5A11Q8WWX8 675 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 TBC1D20Q96BZ9 403 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 VPS39Q96JC1 886 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 UTP23Q9BRU9 249 aaKnown RBP11.75□□□□□ -0.53
COL6A1-205ENST00000492851 HCN3Q9P1Z3 774 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 ZFATQ9P243 1243 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 SUCOQ9UBS9 1254 aaKnown RBP11.75□□□□□ -0.53
COL6A1-205ENST00000492851 SEC14L3Q9UDX4 400 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 ZFP69BQ9UJL9 534 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 DYRK1BQ9Y463 629 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 SAR1BQ9Y6B6 198 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 TEX264Q9Y6I9 313 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 KCNE2Q9Y6J6 123 aa11.75□□□□□ -0.53
COL6A1-205ENST00000492851 CCDC88CQ9P219 2028 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms