RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 QRFPRQ96P65 431 aa10.95□□□□□ -0.66
CRNKL1-204ENST00000490910 SEMA3GQ9NS98 782 aa10.95□□□□□ -0.66
CRNKL1-204ENST00000490910 FAM105AQ9NUU6 356 aa10.95□□□□□ -0.66
CRNKL1-204ENST00000490910 EXTL2Q9UBQ6 330 aa10.95□□□□□ -0.66
CRNKL1-204ENST00000490910 SRRDQ9UH36 339 aa10.95□□□□□ -0.66
CRNKL1-204ENST00000490910 MICAL3Q7RTP6 2002 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 MANBAO00462 879 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 IRAK2O43187 625 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 PROM1O43490 865 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 NME6O75414 186 aaPredicted RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 HLA-DPB1P04440 258 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ADORA3P0DMS8 318 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 CPN2P22792 545 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 RPL3P39023 403 aaKnown RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 RPIAP49247 311 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 CASP9P55211 416 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 SMG7Q92540 1137 aaKnown RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 DNASE1L2Q92874 299 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 RFT1Q96AA3 541 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 BTN2A3PQ96KV6 586 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 FAM129BQ96TA1 746 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 BEX1Q9HBH7 125 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 KLHL28Q9NXS3 571 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 COMMD9Q9P000 198 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 TMPRSS11EQ9UL52 423 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ZNF214Q9UL59 606 aaPredicted RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ALG5Q9Y673 324 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 TAF1P21675 1872 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 LOC730098B7Z3J9 87 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 GNB5O14775 395 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 SCO2O43819 266 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ANXA4P09525 319 aaPredicted RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 IRF1P10914 325 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ITPKAP23677 461 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ARNTP27540 789 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 SCNN1GP51170 649 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 AP2S1P53680 142 aaPredicted RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ERVPABLB-1P60509 514 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 SCAPQ12770 1279 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 PARP15Q460N3 678 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 AKIRIN2Q53H80 203 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ALFQ53S48 1182 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 UBE2R2Q712K3 238 aaPredicted RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 LAX1Q8IWV1 398 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 RGL4Q8IZJ4 473 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 TCEANCQ8N8B7 351 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 COQ8AQ8NI60 647 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 GEMIN6Q8WXD5 167 aaKnown RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 PPCDCQ96CD2 204 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 CCDC115Q96NT0 180 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 BRINP2Q9C0B6 783 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ZNF408Q9H9D4 720 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 MIOSQ9NXC5 875 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 EMC3Q9P0I2 261 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 SH3D21A4FU49 640 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 J3KR12 359 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 SOX14O95416 240 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 BCKDHAP12694 445 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ARCN1P48444 511 aaKnown RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 DAPP51397 102 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 KCNQ1P51787 676 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 YBEYP58557 167 aaPredicted RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 IL10RBQ08334 325 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 TARDBPQ13148 414 aaKnown RBP eCLIP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 BCL2L15Q5TBC7 163 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 FAM205BPQ63HN1 556 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ANKRD34AQ69YU3 496 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 TMEM151AQ8N4L1 468 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 SLC5A8Q8N695 610 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 PIGKQ92643 395 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ZNF566Q969W8 418 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 REPS1Q96D71 796 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ZSWIM3Q96MP5 696 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 C11orf54Q9H0W9 315 aaPredicted RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 RC3H2Q9HBD1 1191 aaKnown RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 TNFRSF12AQ9NP84 129 aa10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 ZNF282Q9UDV7 671 aaPredicted RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 AGO1Q9UL18 857 aaKnown RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 PRG3Q9Y2Y8 225 aaPredicted RBP10.94□□□□□ -0.66
CRNKL1-204ENST00000490910 WASHC1A8K0Z3 465 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 STBD1O95210 358 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 ZBTB7AO95365 584 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 JUNDP17535 347 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 LHCGRP22888 699 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 PIK3CBP42338 1070 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 OR1E2P47887 323 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 PPM1FP49593 454 aaPredicted RBP10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 ETV1P50549 477 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 CLCN4P51793 760 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 GPLD1P80108 840 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 CDH18Q13634 790 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 STK11Q15831 433 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 DUSP7Q16829 419 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 TAPT1Q6NXT6 567 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 CTU1Q7Z7A3 348 aaKnown RBP10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 SPAG16Q8N0X2 631 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 DNAJC22Q8N4W6 341 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 TEX37Q96LM6 180 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 COQ10AQ96MF6 247 aa10.93□□□□□ -0.66
CRNKL1-204ENST00000490910 SLC2A13Q96QE2 648 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms