RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ZNF573Q86YE8 665 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 FOXP4Q8IVH2 680 aaPredicted RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 DRAXINQ8NBI3 349 aaPredicted RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 COLGALT1Q8NBJ5 622 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 OR1J2Q8NGS2 313 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 OR10T2Q8NGX3 314 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 OR52J3Q8NH60 311 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CIDECQ96AQ7 238 aaPredicted RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 RITA1Q96K30 269 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 RBM14Q96PK6 669 aaKnown RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 FSD1Q9BTV5 496 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 EDEM2Q9BV94 578 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ALOXE3Q9BYJ1 711 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CENPHQ9H3R5 247 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 RCOR1Q9UKL0 485 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 RNF6Q9Y252 685 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 GRIP1Q9Y3R0 1128 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.77□□□□□ -1.972e-7■■■■■ 27.9
UBXN4-208ENST00000490163 HS3ST3A1Q9Y663 406 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ARHGEF10O15013 1369 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 TRGV11A0A075B6L2 103 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF814B7Z6K7 855 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 M0QZ24 198 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 XPO1O14980 1071 aaKnown RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 INPPL1O15357 1258 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 SCO2O43819 266 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ERLIN1O75477 346 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 TMCC1O94876 653 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 KDM4BO94953 1096 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 MMP15P51511 669 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CLDN20P56880 219 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 PITX1P78337 314 aaPredicted RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF385BQ569K4 471 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CEP85LQ5SZL2 805 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ARTNQ5T4W7 220 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ATF7IP2Q5U623 682 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 TMEM268Q5VZI3 342 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 C18orf63Q68DL7 685 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 TMEM71Q6P5X7 295 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 FAM114A1Q8IWE2 563 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF611Q8N823 705 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 NEXN-AS1Q8NBZ9 246 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 C17orf47Q8NEP4 570 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 HARBI1Q96MB7 349 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 MAP3K3Q99759 626 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 WRAP53Q9BUR4 548 aaKnown RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ADGRE3Q9BY15 652 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 HHATLQ9HCP6 504 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ACSS1Q9NUB1 689 aaPredicted RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 OR14J1Q9UGF5 321 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CRLS1Q9UJA2 301 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 KCNK6Q9Y257 313 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 LRP5O75197 1615 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CENPVL1A0A0U1RR11 272 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 SGK1O00141 431 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 KRT5P13647 590 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 MYOGP15173 224 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 HNRNPA2B1P22626 353 aaKnown RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CAPGP40121 348 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 GRIA3P42263 894 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 LIMS1P48059 325 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 NCKAP1LP55160 1127 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 LBHQ53QV2 105 aaPredicted RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 PIK3CD-AS1Q5SR53 167 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 STXBP5Q5T5C0 1151 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 HIST2H2BCQ6DN03 193 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 HIST2H2BDQ6DRA6 164 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 LRRC31Q6UY01 552 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 MARK2Q7KZI7 788 aaKnown RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 NRARPQ7Z6K4 114 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 MRGPREQ86SM8 312 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CBWD2Q8IUF1 395 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CCDC148Q8NFR7 591 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 TCP11Q8WWU5 503 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 KCNJ9Q92806 393 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ADAD1Q96M93 576 aaKnown RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 DDX50Q9BQ39 737 aaKnown RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 CCDC77Q9BR77 488 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 THUMPD2Q9BTF0 503 aaKnown RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 LMF2Q9BU23 707 aaKnown RBP2.77□□□□□ -1.97
UBXN4-208ENST00000490163 TM2D2Q9BX73 214 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 KLHL1Q9NR64 748 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 ACOXLQ9NUZ1 547 aa2.77□□□□□ -1.97
UBXN4-208ENST00000490163 TNS2Q63HR2 1409 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 PHLPP2Q6ZVD8 1323 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 PCDH11YQ9BZA8 1340 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 WDR33Q9C0J8 1336 aaKnown RBP2.76□□□□□ -1.97
UBXN4-208ENST00000490163 A0A0B4J293 547 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 TCRBV7S3A2A0A539 114 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 HAS3O00219 553 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 OTCP00480 354 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 EBLN1P0CF75 366 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 VPREB1P12018 145 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 CRKLP46109 303 aaKnown RBP2.76□□□□□ -1.97
UBXN4-208ENST00000490163 KCNJ1P48048 391 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 ZNF75DP51815 510 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 OR1D5P58170 312 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 SELENOVP59797 346 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 PRKAA1Q13131 559 aa2.76□□□□□ -1.97
UBXN4-208ENST00000490163 RIGQ13278 110 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms