RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PHLDB2Q86SQ0 1253 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 CAND1Q86VP6 1230 aaKnown RBP6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 ZNF547Q8IVP9 402 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 KATNAL2Q8IYT4 538 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 RCOR2Q8IZ40 523 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 PAF1Q8N7H5 531 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 C19orf47Q8N9M1 422 aaKnown RBP6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 C1orf131Q8NDD1 294 aaKnown RBP6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 MIEF2Q96C03 454 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 ERP44Q9BS26 406 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 TUBB6Q9BUF5 446 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 CHRNA10Q9GZZ6 450 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 TSPYL1Q9H0U9 437 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 SLITRK2Q9H156 845 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 ASB8Q9H765 288 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 TRIM45Q9H8W5 580 aaPredicted RBP6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 SH2D2AQ9NP31 389 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 TMEM248Q9NWD8 314 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 ZNF226Q9NYT6 803 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 SLC24A2Q9UI40 661 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 IKZF3Q9UKT9 509 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 KLF13Q9Y2Y9 288 aaPredicted RBP6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 LIPGQ9Y5X9 500 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 DNAH7Q8WXX0 4024 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 HECTD4Q9Y4D8 3996 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 TMEM191CA6NGB0 347 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 E5RJQ4 531 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 H3BQF6 201 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 CDK2AP1O14519 115 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 AQP7O14520 342 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 HS3ST1O14792 307 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 DSCR3O14972 297 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 KMOO15229 486 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 DAPK3O43293 454 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 HKR1P10072 659 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 SLC25A16P16260 332 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 HLA-DPA1P20036 260 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 TIMP3P35625 211 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 GJC1P36383 396 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 COILP38432 576 aaPredicted RBP6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 HSPA9P38646 679 aaKnown RBP6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 GPD2P43304 727 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 GABRB2P47870 512 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 OR1D4P47884 311 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 MARCKSL1P49006 195 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 ARSFP54793 590 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 CAV1Q03135 178 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 TERF2Q15554 542 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 CYP1B1Q16678 543 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 LRIG3Q6UXM1 1119 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 DEF8Q6ZN54 512 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 USP43Q70EL4 1123 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 MILR1Q7Z6M3 343 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 CROCCP2Q86T23 111 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 ZNF441Q8N8Z8 693 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 BBOF1Q8ND07 529 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 FAM76AQ8TAV0 307 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 CCHCR1Q8TD31 782 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 DENND1AQ8TEH3 1009 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 ZNF418Q8TF45 676 aaPredicted RBP6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 C18orf8Q96DM3 657 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 CFAP57Q96MR6 1250 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 WFIKKN1Q96NZ8 548 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 MCEEQ96PE7 176 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 MCCC1Q96RQ3 725 aaPredicted RBP6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 FMO2Q99518 471 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 TRIM31Q9BZY9 425 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 OR2AG1Q9H205 316 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 DPH5Q9H2P9 285 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 KIR3DX1Q9H7L2 352 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 BARX1Q9HBU1 254 aaPredicted RBP6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 IRAK4Q9NWZ3 460 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 ALKBH4Q9NXW9 302 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 HCN3Q9P1Z3 774 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 ACAD8Q9UKU7 415 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 NEU3Q9UQ49 428 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 SNRNP200O75643 2136 aaKnown RBP6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 DOCK7Q96N67 2140 aa6.95□□□□□ -1.3
EXOSC3-206ENST00000489414 IGLV3-12A0A075B6K2 115 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 SIGLEC16A6NMB1 481 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 C3orf84H3BNL1 204 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 CDC7O00311 574 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 PEX1O43933 1283 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 ITGA10O75578 1167 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 RGS9O75916 674 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 RNF8O76064 485 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 TJP3O95049 919 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 KRT1P04264 644 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 MYZAPP0CAP1 466 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 KRT3P12035 628 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 RHOQP17081 205 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 PSMA2P25787 234 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 EMP2P54851 167 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 EIF3BP55884 814 aaKnown RBP6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 WNT3P56703 355 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 GSCP56915 257 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 DSC2Q02487 901 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 PTSQ03393 145 aa6.94□□□□□ -1.3
EXOSC3-206ENST00000489414 OCA2Q04671 838 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms