RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 ERN2Q76MJ5 926 aaKnown RBP16.31■□□□□ 0.2
FDPS-212ENST00000487002 PIK3C3Q8NEB9 887 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 OR2L2Q8NH16 312 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.31■□□□□ 0.2
FDPS-212ENST00000487002 SLC5A11Q8WWX8 675 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 SMG7Q92540 1137 aaKnown RBP16.31■□□□□ 0.2
FDPS-212ENST00000487002 UBE2E3Q969T4 207 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 HSH2DQ96JZ2 352 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 REEP4Q9H6H4 257 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 LIN28AQ9H9Z2 209 aaKnown RBP16.31■□□□□ 0.2
FDPS-212ENST00000487002 CCDC177Q9NQR7 707 aaPredicted RBP16.31■□□□□ 0.2
FDPS-212ENST00000487002 VNN3Q9NY84 501 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 FZD4Q9ULV1 537 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 COL4A3Q01955 1670 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 PDE4DIPQ5VU43 2346 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 BCKDKO14874 412 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 DNAJB5O75953 348 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 CCDC159P0C7I6 412 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 IL7RP16871 459 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 POLR2IP36954 125 aaKnown RBP16.31■□□□□ 0.2
FDPS-212ENST00000487002 PIK3CBP42338 1070 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 RXRGP48443 463 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 PHEXP78562 749 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 TAP2Q03519 686 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 PDE7AQ13946 482 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 XAF1Q6GPH4 301 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 RBM23Q86U06 439 aaKnown RBP16.31■□□□□ 0.2
FDPS-212ENST00000487002 TRIM74Q86UV6 250 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 GPR156Q8NFN8 814 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 SETD7Q8WTS6 366 aaKnown RBP16.31■□□□□ 0.2
FDPS-212ENST00000487002 GAB3Q8WWW8 586 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 TRIT1Q9H3H1 467 aaKnown RBP16.31■□□□□ 0.2
FDPS-212ENST00000487002 DYRK4Q9NR20 520 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 NAALAD2Q9Y3Q0 740 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 U3KQV3 271 aa16.31■□□□□ 0.2
FDPS-212ENST00000487002 B4GAT1O43505 415 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 HLA-EP13747 358 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 PRKACGP22612 351 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 ACADLP28330 430 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 VIPR2P41587 438 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 HPCAP84074 193 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 RPA4Q13156 261 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 RGNQ15493 299 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 SF1Q15637 639 aaKnown RBP16.3■□□□□ 0.2
FDPS-212ENST00000487002 CTU2Q2VPK5 515 aaKnown RBP16.3■□□□□ 0.2
FDPS-212ENST00000487002 CATSPEREQ5SY80 951 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 GPR107Q5VW38 600 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 KDM4DQ6B0I6 523 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 NXPE4Q6UWF7 544 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 CHST15Q7LFX5 561 aaPredicted RBP16.3■□□□□ 0.2
FDPS-212ENST00000487002 TRMT11Q7Z4G4 463 aaKnown RBP16.3■□□□□ 0.2
FDPS-212ENST00000487002 DSG4Q86SJ6 1040 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 HORMAD1Q86X24 394 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 ZNF547Q8IVP9 402 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 RAB7BQ96AH8 199 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 TMEM245Q9H330 911 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 FANCEQ9HB96 536 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 MYNNQ9NPC7 610 aa16.3■□□□□ 0.2
FDPS-212ENST00000487002 C1QCP02747 245 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 SLC6A11P48066 632 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 MESP2Q0VG99 397 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 PPP1R8Q12972 351 aaKnown RBP16.29■□□□□ 0.2
FDPS-212ENST00000487002 GAB1Q13480 694 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 STARD3Q14849 445 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 MEP1AQ16819 746 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 ANKRD34AQ69YU3 496 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 COMMD6Q7Z4G1 85 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 SPARTQ8N0X7 666 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 OR4A15Q8NGL6 344 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 OR10Q1Q8NGQ4 319 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 MTERF3Q96E29 417 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 FAM129BQ96TA1 746 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 ADPRHL2Q9NX46 363 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 KIAA0100Q14667 2235 aaKnown RBP16.29■□□□□ 0.2
FDPS-212ENST00000487002 C1QTNF3-AMACRE9PGA6 284 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 SLC1A7O00341 560 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 PI15O43692 258 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 MMP20O60882 483 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 POP7O75817 140 aaKnown RBP16.29■□□□□ 0.2
FDPS-212ENST00000487002 ZNF8P17098 575 aaPredicted RBP16.29■□□□□ 0.2
FDPS-212ENST00000487002 VLDLRP98155 873 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 ELOAQ14241 798 aaKnown RBP16.29■□□□□ 0.2
FDPS-212ENST00000487002 ZNF234Q14588 700 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 FAM78AQ5JUQ0 283 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 LCTLQ6UWM7 567 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 C11orf65Q8NCR3 313 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 ASB16Q96NS5 453 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 DPH2Q9BQC3 489 aaPredicted RBP16.29■□□□□ 0.2
FDPS-212ENST00000487002 HDAC8Q9BY41 377 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 REEP1Q9H902 201 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 PRM3Q9NNZ6 103 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 WBP1LQ9NX94 342 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 EXO1Q9UQ84 846 aaKnown RBP16.29■□□□□ 0.2
FDPS-212ENST00000487002 SH2B3Q9UQQ2 575 aa16.29■□□□□ 0.2
FDPS-212ENST00000487002 NUP214P35658 2090 aaPredicted RBP16.29■□□□□ 0.2
FDPS-212ENST00000487002 C2orf16Q68DN1 1984 aa16.28■□□□□ 0.2
FDPS-212ENST00000487002 M0QX08 132 aa16.28■□□□□ 0.2
FDPS-212ENST00000487002 JRKO75564 520 aa16.28■□□□□ 0.2
FDPS-212ENST00000487002 ATE1O95260 518 aa16.28■□□□□ 0.2
FDPS-212ENST00000487002 FCHO2Q0JRZ9 810 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms