RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 SLC28A2O43868 658 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 SNX3O60493 162 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 RNASEH1O60930 286 aaKnown RBP4.09□□□□□ -1.75
XPA-203ENST00000485042 NME6O75414 186 aaPredicted RBP4.09□□□□□ -1.75
XPA-203ENST00000485042 ATP6AP2O75787 350 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 PDE9AO76083 593 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 STAG3L1P0CL83 205 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 MSNP26038 577 aaKnown RBP4.09□□□□□ -1.75
XPA-203ENST00000485042 SERPINB6P35237 376 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 CLK1P49759 484 aaKnown RBP4.09□□□□□ -1.75
XPA-203ENST00000485042 THOP1P52888 689 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 NONOQ15233 471 aaKnown RBP eCLIP4.09□□□□□ -1.75
XPA-203ENST00000485042 RPS6KA1Q15418 735 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 UGT3A2Q3SY77 523 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 PHLDA2Q53GA4 152 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 STXBP5Q5T5C0 1151 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 CORO6Q6QEF8 472 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 CREB3L2Q70SY1 520 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 TMEM139Q8IV31 216 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 CDK20Q8IZL9 346 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 LGI2Q8N0V4 545 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 PELI3Q8N2H9 469 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 SFRP1Q8N474 314 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 ZNF441Q8N8Z8 693 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 OR11H4Q8NGC9 324 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 OR4K1Q8NGD4 311 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 PHF21BQ96EK2 531 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 MYADMQ96S97 322 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 PI4K2AQ9BTU6 479 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 POLR3CQ9BUI4 534 aaPredicted RBP4.09□□□□□ -1.75
XPA-203ENST00000485042 PANK2Q9BZ23 570 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 IL25Q9H293 177 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 AKIRIN1Q9H9L7 192 aaPredicted RBP4.09□□□□□ -1.75
XPA-203ENST00000485042 RNPEPL1Q9HAU8 725 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 APOBEC3GQ9HC16 384 aaKnown RBP4.09□□□□□ -1.75
XPA-203ENST00000485042 RAB9BQ9NP90 201 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 SLCO1C1Q9NYB5 712 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 SPG21Q9NZD8 308 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 DAPK2Q9UIK4 370 aa4.09□□□□□ -1.75
XPA-203ENST00000485042 KDM3BQ7LBC6 1761 aa4.09□□□□□ -1.76
XPA-203ENST00000485042 PAPPA2Q9BXP8 1791 aa4.09□□□□□ -1.76
XPA-203ENST00000485042 A0A0A6YYC8 382 aaPredicted RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 SRRM3A6NNA2 597 aaPredicted RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 PROB1E7EW31 1015 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 I3L1I5 382 aaPredicted RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 RAD51DO75771 328 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 AKAP3O75969 853 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 SBK2P0C263 348 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 ALDH1B1P30837 517 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 CCKBRP32239 447 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 MAP2K2P36507 400 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 CDX1P47902 265 aaPredicted RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 ZNF81P51508 661 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 ADARP55265 1226 aaKnown RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 YBEYP58557 167 aaPredicted RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 BPIFB3P59826 476 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 EGR4Q05215 589 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 MBTD1Q05BQ5 628 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 ZBTB17Q13105 803 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 SNTA1Q13424 505 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 ODF4Q2M2E3 257 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 IFI44LQ53G44 452 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 CYP4A22Q5TCH4 519 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 ETFRF1Q6IPR1 90 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 USP50Q70EL3 339 aaPredicted RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 SIAH3Q8IW03 269 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 CNTN4Q8IWV2 1026 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 MMD2Q8IY49 270 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 APCDD1Q8J025 514 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 ZNF619Q8N2I2 560 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 KIAA0895Q8NCT3 520 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 ELP5Q8TE02 316 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 SLC26A7Q8TE54 656 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 PYCR2Q96C36 320 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 AP2M1Q96CW1 435 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 SNRNP40Q96DI7 357 aaKnown RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 BICD1Q96G01 975 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 PGM2Q96G03 612 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 FAM71F1Q96KD3 344 aaPredicted RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 GAL3ST4Q96RP7 486 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 PKP4Q99569 1192 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 URM1Q9BTM9 101 aaKnown RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 TM6SF1Q9BZW5 370 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 TNMDQ9H2S6 317 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 Q9H8V8 135 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 FKRPQ9H9S5 495 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 LRRC4Q9HBW1 653 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 TCF7L2Q9NQB0 619 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 SPHK1Q9NYA1 384 aa4.08□□□□□ -1.76
XPA-203ENST00000485042 IBTKQ9P2D0 1353 aaPredicted RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 HBS1LQ9Y450 684 aaKnown RBP4.08□□□□□ -1.76
XPA-203ENST00000485042 CEP290O15078 2479 aa4.07□□□□□ -1.76
XPA-203ENST00000485042 KIAA0100Q14667 2235 aaKnown RBP4.07□□□□□ -1.76
XPA-203ENST00000485042 PSME4Q14997 1843 aa4.07□□□□□ -1.76
XPA-203ENST00000485042 SPEF2Q9C093 1822 aa4.07□□□□□ -1.76
XPA-203ENST00000485042 DDX60Q8IY21 1712 aaKnown RBP4.07□□□□□ -1.76
XPA-203ENST00000485042 COL4A1P02462 1669 aa4.07□□□□□ -1.76
XPA-203ENST00000485042 COL3A1P02461 1466 aaPredicted RBP4.07□□□□□ -1.76
XPA-203ENST00000485042 NPC1L1Q9UHC9 1359 aa4.07□□□□□ -1.76
XPA-203ENST00000485042 CASTOR2A6NHX0 329 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms