RNA–Protein interactions for RNA: ENST00000482028.5

PABPC4-213, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-213ENST00000482028 LTBRP36941 435 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 CCR5P51681 352 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 DGKEP52429 567 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 ARHGDIAP52565 204 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 REEP5Q00765 189 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 RELAQ04206 551 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 PRDX1Q06830 199 aaKnown RBP12.46□□□□□ -0.41
PABPC4-213ENST00000482028 NFATC4Q14934 902 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 PDK3Q15120 406 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 C2orf27AQ580R0 203 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 SFT2D3Q587I9 215 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 PRAMEF9Q5VWM5 478 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 ABRAXAS1Q6UWZ7 409 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 XKR5Q6UX68 686 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 SPRED1Q7Z699 444 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 DCP2Q8IU60 420 aaKnown RBP12.46□□□□□ -0.41
PABPC4-213ENST00000482028 RBM12BQ8IXT5 1001 aaKnown RBP12.46□□□□□ -0.41
PABPC4-213ENST00000482028 LILRA3Q8N6C8 439 aaPredicted RBP12.46□□□□□ -0.41
PABPC4-213ENST00000482028 KRTCAP2Q8N6L1 136 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 C1orf52Q8N6N3 182 aaKnown RBP12.46□□□□□ -0.41
PABPC4-213ENST00000482028 LRTOMTQ8WZ04 291 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 FAM162AQ96A26 154 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 BIRC7Q96CA5 298 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 WDR92Q96MX6 357 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 ASPSCR1Q9BZE9 553 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 REXO4Q9GZR2 422 aaKnown RBP12.46□□□□□ -0.41
PABPC4-213ENST00000482028 MKRN2Q9H000 416 aaKnown RBP12.46□□□□□ -0.41
PABPC4-213ENST00000482028 PCED1AQ9H1Q7 454 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 NEUROD4Q9HD90 331 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 PRM3Q9NNZ6 103 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 PRDM9Q9NQV7 894 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 DCAF13Q9NV06 445 aaKnown RBP12.46□□□□□ -0.41
PABPC4-213ENST00000482028 TMEM184CQ9NVA4 438 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 TRNAU1APQ9NX07 287 aaKnown RBP12.46□□□□□ -0.41
PABPC4-213ENST00000482028 EHD3Q9NZN3 535 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 DNAJB9Q9UBS3 223 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 EGFL7Q9UHF1 273 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 ZNF639Q9UID6 485 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 TMEM98Q9Y2Y6 226 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 AP4B1Q9Y6B7 739 aa12.46□□□□□ -0.41
PABPC4-213ENST00000482028 RNF103-CHMP3A0A140T963 221 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 OR5K4A6NMS3 321 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 CLIC1O00299 241 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 CAPN5O15484 640 aaPredicted RBP12.45□□□□□ -0.42
PABPC4-213ENST00000482028 CLOCKO15516 846 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 PKLRP30613 574 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
PABPC4-213ENST00000482028 RABIFP47224 123 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 ANXA11P50995 505 aaKnown RBP12.45□□□□□ -0.42
PABPC4-213ENST00000482028 MTPNP58546 118 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 RPS13P62277 151 aaKnown RBP12.45□□□□□ -0.42
PABPC4-213ENST00000482028 DDX39BQ13838 428 aaKnown RBP12.45□□□□□ -0.42
PABPC4-213ENST00000482028 LRRC32Q14392 662 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 UGT8Q16880 541 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 LRRC36Q1X8D7 754 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 CCSMST1Q4G0I0 132 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 DEPDC1Q5TB30 811 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 KHDRBS2Q5VWX1 349 aaKnown RBP12.45□□□□□ -0.42
PABPC4-213ENST00000482028 TRIM40Q6P9F5 258 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 TMEM154Q6P9G4 183 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 DOK6Q6PKX4 331 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 FAM83HQ6ZRV2 1179 aaPredicted RBP12.45□□□□□ -0.42
PABPC4-213ENST00000482028 COMMD6Q7Z4G1 85 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 NUDT13Q86X67 352 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 DTWD1Q8N5C7 304 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 METTL25Q8N6Q8 603 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 OR5AR1Q8NGP9 310 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 OR10A6Q8NH74 314 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 ZFP28Q8NHY6 868 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.45□□□□□ -0.42
PABPC4-213ENST00000482028 RGMAQ96B86 450 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 PPCDCQ96CD2 204 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 THAP11Q96EK4 314 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 NRBF2Q96F24 287 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 C12orf66Q96MD2 445 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 CAMK1GQ96NX5 476 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 TRAPPC9Q96Q05 1148 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 FERD3LQ96RJ6 166 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 ANKRD60Q9BZ19 345 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 ROGDIQ9GZN7 287 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 RPF2Q9H7B2 306 aaKnown RBP12.45□□□□□ -0.42
PABPC4-213ENST00000482028 IFT80Q9P2H3 777 aaPredicted RBP12.45□□□□□ -0.42
PABPC4-213ENST00000482028 BAG5Q9UL15 447 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 SNX7Q9UNH6 387 aa12.45□□□□□ -0.42
PABPC4-213ENST00000482028 MRPS17Q9Y2R5 130 aaKnown RBP12.45□□□□□ -0.42
PABPC4-213ENST00000482028 CROCCQ5TZA2 2017 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 PRSS38A1L453 326 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 A6NHS1 94 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 CHURC1-FNTBB4DL54 471 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 RFXAPO00287 272 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 PLK4O00444 970 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 TXNDC9O14530 226 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 LATO43561 262 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 DFNA5O60443 496 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 SCN2BO60939 215 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 ADAM23O75077 832 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 CREG1O75629 220 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 SMNDC1O75940 238 aaKnown RBP eCLIP12.44□□□□□ -0.42
PABPC4-213ENST00000482028 EGFP01133 1207 aa12.44□□□□□ -0.42
PABPC4-213ENST00000482028 FAM58BPP0C7Q3 252 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms