RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 LY6G5CQ5SRR4 150 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 CHRDL2Q6WN34 429 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 ZC3HC1Q86WB0 502 aaKnown RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 OR4K1Q8NGD4 311 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 BRF2Q9HAW0 419 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 TMEM165Q9HC07 324 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 SMURF1Q9HCE7 757 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 CYTH4Q9UIA0 394 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 PARP4Q9UKK3 1724 aaKnown RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 ZNF860A6NHJ4 632 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 MUSKO15146 869 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 TLX2O43763 284 aaPredicted RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 SLC2A2P11168 524 aaPredicted RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 SMSP52788 366 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 DPY19L1Q2PZI1 675 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 PTCHD3Q3KNS1 767 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 MSS51Q4VC12 460 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 ZNF776Q68DI1 518 aaPredicted RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 HMGN2P46Q86SG4 172 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 GATSQ8NAP1 163 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 FKBP14Q9NWM8 211 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 H0YGN5 161 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 ITGA10O75578 1167 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 CNTN5O94779 1100 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 PAK4O96013 591 aaPredicted RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 PRKACGP22612 351 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 DAG1Q14118 895 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 TSTQ16762 297 aaKnown RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 GXYLT1Q4G148 440 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 TMED4Q7Z7H5 227 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 ZNF599Q96NL3 588 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 ERMAPQ96PL5 475 aaPredicted RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 CGREF1Q99674 301 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 SHPRHQ149N8 1683 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 RLN2P04090 185 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 PER3P56645 1201 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 ZNF280AP59817 542 aaPredicted RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 CDK6Q00534 326 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 TMEM126BQ8IUX1 230 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 CEP76Q8TAP6 659 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 RIT1Q92963 219 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 PYURFQ96I23 114 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 EFCAB11Q9BUY7 163 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 KDELR3O43731 214 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 DLX3O60479 287 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 BEND4Q6ZU67 534 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 LRRC70Q7Z2Q7 622 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 RNF130Q86XS8 419 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 PDPRQ8NCN5 879 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 SLC35F5Q8WV83 523 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 CD180Q99467 661 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.64□□□□□ -0.71
VAPB-204ENST00000475243 SLC25A11Q02978 314 aaKnown RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 GPRC6AQ5T6X5 926 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 OR2T5Q6IEZ7 315 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 OR2T29Q8NH02 315 aa10.64□□□□□ -0.71
VAPB-204ENST00000475243 NSUN3Q9H649 340 aaKnown RBP10.64□□□□□ -0.71
VAPB-204ENST00000475243 WASHC1A8K0Z3 465 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 WASH3PC4AMC7 463 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 LEFTY2O00292 366 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 ACOX3O15254 700 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 ANXA8P13928 327 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 NDUFS1P28331 727 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 BLMHQ13867 455 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 LRP8Q14114 963 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 PLEKHG6Q3KR16 790 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 WASH2PQ6VEQ5 465 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 CCDC116Q8IYX3 515 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 TAMM41Q96BW9 452 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 C17orf62Q9BQA9 187 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 PAK6Q9NQU5 681 aaPredicted RBP10.63□□□□□ -0.71
VAPB-204ENST00000475243 SERTAD3Q9UJW9 196 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 TEX264Q9Y6I9 313 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 GRID2O43424 1007 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 ITIH1P19827 911 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 CNPY1Q3B7I2 92 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 TPRG1Q6ZUI0 275 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 SLC5A11Q8WWX8 675 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 NXPE2Q96DL1 559 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 MMABQ96EY8 250 aaPredicted RBP10.63□□□□□ -0.71
VAPB-204ENST00000475243 ORAI3Q9BRQ5 295 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 SMOC2Q9H3U7 446 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 TRPV4Q9HBA0 871 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 NCDNQ9UBB6 729 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 BAIAP2Q9UQB8 552 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 COQ4Q9Y3A0 265 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 C13orf42A0A1B0GVH6 325 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 BPNT1O95861 308 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 DECR1Q16698 335 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 PKP2Q99959 881 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 TMEM109Q9BVC6 243 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 GIMAP2Q9UG22 337 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 FAM170BA6NMN3 283 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 C11orf98E9PRG8 122 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 J3QRK9 145 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 SOX1O00570 391 aaPredicted RBP10.63□□□□□ -0.71
VAPB-204ENST00000475243 COQ9O75208 318 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 CLEC3AO75596 197 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 OGDHQ02218 1023 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 TMEM115Q12893 351 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms