RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 GPR17Q13304 367 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 GAMTQ14353 236 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 TEX35Q5T0J7 233 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 TAF3Q5VWG9 929 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 C9orf57Q5W0N0 161 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 NEK5Q6P3R8 708 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 FOXL2NBQ6ZUU3 175 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 C16orf82Q7Z2V1 217 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 ANKRD33Q7Z3H0 272 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 SERPINA12Q8IW75 414 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 THEM5Q8N1Q8 247 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 KDM8Q8N371 416 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 MAPKAPK5-AS1Q8N8E1 139 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 NIPA2Q8N8Q9 360 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 RNF149Q8NC42 400 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 OR13A1Q8NGR1 328 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 U2AF1L4Q8WU68 220 aaKnown RBP3.87□□□□□ -1.79
BRCA1-212ENST00000473961 PRCCQ92733 491 aaPredicted RBP3.87□□□□□ -1.79
BRCA1-212ENST00000473961 GGHQ92820 318 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 TMEM143Q96AN5 459 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 C4orf45Q96LM5 186 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 NSMCE2Q96MF7 247 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 FAM111AQ96PZ2 611 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 KCNK16Q96T55 309 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 OR2B2Q9GZK3 357 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 P2RY12Q9H244 342 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 BICC1Q9H694 974 aaKnown RBP3.87□□□□□ -1.79
BRCA1-212ENST00000473961 DDX31Q9H8H2 851 aaKnown RBP3.87□□□□□ -1.79
BRCA1-212ENST00000473961 LRRC4Q9HBW1 653 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 SYTL2Q9HCH5 934 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 TMOD3Q9NYL9 352 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 MIS18AQ9NYP9 233 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 KCNN3Q9UGI6 736 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 TNNQ9UQP3 1299 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 PIN4Q9Y237 131 aaKnown RBP3.87□□□□□ -1.79
BRCA1-212ENST00000473961 KCNK6Q9Y257 313 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 PCDHGB1Q9Y5G3 927 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 R4GN57 208 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 SMARCA2P51531 1590 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 HEG1Q9ULI3 1381 aa3.87□□□□□ -1.79
BRCA1-212ENST00000473961 COL3A1P02461 1466 aaPredicted RBP3.86□□□□□ -1.79
BRCA1-212ENST00000473961 GOLGA3Q08378 1498 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 C5orf51A6NDU8 294 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 E5RGE8 158 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 ACOT8O14734 319 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 MAGEB2O15479 319 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 CDK2AP2O75956 126 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 REC8O95072 547 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 EDN1P05305 212 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 MMP10P09238 476 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 F3P13726 295 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 AMD1P17707 334 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 DNA2P51530 1060 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 SMSP52788 366 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 ADARP55265 1226 aaKnown RBP3.86□□□□□ -1.79
BRCA1-212ENST00000473961 HUNKP57058 714 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 YBEYP58557 167 aaPredicted RBP3.86□□□□□ -1.79
BRCA1-212ENST00000473961 IRX4P78413 519 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 KCNJ10P78508 379 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 KEAP1Q14145 624 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 PDK1Q15118 436 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 CCDC6Q16204 474 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 INAQ16352 499 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 ZNF770Q6IQ21 691 aaPredicted RBP3.86□□□□□ -1.79
BRCA1-212ENST00000473961 SPSB3Q6PJ21 355 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 RBM43Q6ZSC3 357 aaKnown RBP3.86□□□□□ -1.79
BRCA1-212ENST00000473961 MARK2Q7KZI7 788 aaKnown RBP3.86□□□□□ -1.79
BRCA1-212ENST00000473961 MARVELD2Q8N4S9 558 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 GBP7Q8N8V2 638 aaPredicted RBP3.86□□□□□ -1.79
BRCA1-212ENST00000473961 POC1AQ8NBT0 407 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 CLEC1AQ8NC01 280 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 CNNM3Q8NE01 707 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 OR7A2PQ8NGA2 310 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 CCDC110Q8TBZ0 833 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 CD101Q93033 1021 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 LGALS12Q96DT0 336 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 LMLNQ96KR4 655 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 NDNQ99608 321 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 PRMT1Q99873 361 aaKnown RBP3.86□□□□□ -1.79
BRCA1-212ENST00000473961 ALKBH7Q9BT30 221 aaPredicted RBP3.86□□□□□ -1.79
BRCA1-212ENST00000473961 XPO4Q9C0E2 1151 aaKnown RBP3.86□□□□□ -1.79
BRCA1-212ENST00000473961 NYXQ9GZU5 481 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 DPEP2Q9H4A9 486 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 OR6C2Q9NZP2 312 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 ACTR3BQ9P1U1 418 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 ERVK-19Q9WJR5 959 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 NCKAP1Q9Y2A7 1128 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 NSG2Q9Y328 171 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 VPS8Q8N3P4 1428 aa3.86□□□□□ -1.79
BRCA1-212ENST00000473961 PEG3Q9GZU2 1588 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 IGLV9-49A0A0B4J1Y8 123 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 A0A0G2JLW4 131 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 ANKDD1BA6NHY2 528 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 PRAC2D3DTV9 90 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 TULP2O00295 520 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 KLF11O14901 512 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 TEX28O15482 410 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 INSIG1O15503 277 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 NOL3O60936 208 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms