RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 GAREM2Q75VX8 874 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 KRT73Q86Y46 540 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 DEPDC4Q8N2C3 294 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 SYNPOQ8N3V7 929 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 OR2T12Q8NG77 320 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 DNAJA4Q8WW22 397 aaPredicted RBP9.77□□□□□ -0.85
APTX-216ENST00000472896 PYCR2Q96C36 320 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 CHFRQ96EP1 664 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 C1orf74Q96LT6 269 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 PITX2Q99697 317 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 CENPOQ9BU64 300 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 SCNM1Q9BWG6 230 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 TRIM8Q9BZR9 551 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 TUBB1Q9H4B7 451 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 TREX1Q9NSU2 369 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 EXD2Q9NVH0 621 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 DPP3Q9NY33 737 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 KIF26AQ9ULI4 1882 aaPredicted RBP9.77□□□□□ -0.85
APTX-216ENST00000472896 KCNE2Q9Y6J6 123 aa9.77□□□□□ -0.85
APTX-216ENST00000472896 CCDC163A0A0D9SF12 145 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 SLC35F4A4IF30 521 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 OR6C70A6NIJ9 312 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 A8MV72 311 aaPredicted RBP9.76□□□□□ -0.85
APTX-216ENST00000472896 TRIM77I1YAP6 450 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 SLC9A3R1O14745 358 aaPredicted RBP9.76□□□□□ -0.85
APTX-216ENST00000472896 ANKRD28O15084 1053 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 SSX4O60224 188 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 CRCPO75575 148 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 NFICP08651 508 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 OR4Q2P0C623 313 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 LINC00032P0C843 101 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 PSKH1P11801 424 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 UQCRC1P31930 480 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 MAPK12P53778 367 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 UFM1P61960 85 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 SCN1BQ07699 218 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 EFR3AQ14156 821 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 SOWAHAQ2M3V2 549 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 XKR7Q5GH72 579 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 ESRP1Q6NXG1 681 aaKnown RBP9.76□□□□□ -0.85
APTX-216ENST00000472896 ENPP6Q6UWR7 440 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 ZNF782Q6ZMW2 699 aaPredicted RBP9.76□□□□□ -0.85
APTX-216ENST00000472896 BNIPLQ7Z465 357 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 ISCA2Q86U28 154 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 AMIGO1Q86WK6 493 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 RNF130Q86XS8 419 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 RHEBL1Q8TAI7 183 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 FBXO30Q8TB52 745 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 FAM162AQ96A26 154 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 RHBDF1Q96CC6 855 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 AP2M1Q96CW1 435 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 METTL2AQ96IZ6 378 aaKnown RBP9.76□□□□□ -0.85
APTX-216ENST00000472896 SUSD3Q96L08 255 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 ZNF583Q96ND8 569 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 FRMD6Q96NE9 622 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 WDFY2Q96P53 400 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 NEDD4LQ96PU5 975 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 PSKH2Q96QS6 385 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 APOL2Q9BQE5 337 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 EDEM2Q9BV94 578 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 TTLL2Q9BWV7 592 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.76□□□□□ -0.85
APTX-216ENST00000472896 FAM83DQ9H4H8 585 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 RIBC2Q9H4K1 309 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 MRPL39Q9NYK5 338 aaKnown RBP9.76□□□□□ -0.85
APTX-216ENST00000472896 NUFIP1Q9UHK0 495 aaKnown RBP9.76□□□□□ -0.85
APTX-216ENST00000472896 LHX6Q9UPM6 363 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 TNFSF13BQ9Y275 285 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 KLHL20Q9Y2M5 609 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 PKP3Q9Y446 797 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 YIPF1Q9Y548 306 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 ANK1P16157 1881 aa9.76□□□□□ -0.85
APTX-216ENST00000472896 OTOL1A6NHN0 477 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 LACTBL1A8MY62 500 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 C9JVG2 144 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 SEC14L5O43304 696 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 OR2B3O76000 313 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 PRAMEF12O95522 483 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 ERCC2P18074 760 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 CPN2P22792 545 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 MYL9P24844 172 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 CSTF2P33240 577 aaKnown RBP eCLIP9.75□□□□□ -0.85
APTX-216ENST00000472896 CA5AP35218 305 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 CASP2P42575 452 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 BCAT1P54687 386 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 GEMP55040 296 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 DIO3P55073 304 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 LCP2Q13094 533 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 DUSP4Q13115 394 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 ATP6AP1LQ52LC2 224 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 KIAA1614Q5VZ46 1190 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 KDM4DQ6B0I6 523 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 TIGD7Q6NT04 549 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 ARHGAP36Q6ZRI8 547 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 UNC93AQ86WB7 457 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 FAM131BQ86XD5 332 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 HS3ST5Q8IZT8 346 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 PTGR2Q8N8N7 351 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 FAM181AQ8N9Y4 354 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 ZNF548Q8NEK5 533 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms