RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 POLDIP3Q9BY77 421 aaKnown RBP8.77□□□□□ -1.01
VCL-204ENST00000472585 UCK2Q9BZX2 261 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 DRC3Q9H069 523 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 SPATA7Q9P0W8 599 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 PCYOX1Q9UHG3 505 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 ST6GALNAC2Q9UJ37 374 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 SH2B3Q9UQQ2 575 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 MED16Q9Y2X0 877 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 EPN1Q9Y6I3 576 aaPredicted RBP8.77□□□□□ -1.01
VCL-204ENST00000472585 STAB1Q9NY15 2570 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 NBEAL1Q6ZS30 2694 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 H7BY64 318 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 SGK494L7N484 410 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 LCMT2O60294 686 aaKnown RBP8.76□□□□□ -1.01
VCL-204ENST00000472585 SLC16A8O95907 504 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 SP1P08047 785 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 ANXA5P08758 320 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 HOXD4P09016 255 aaPredicted RBP8.76□□□□□ -1.01
VCL-204ENST00000472585 ZSCAN5DPP0CG00 497 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 MSX1P28360 303 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 CHRNB4P30926 498 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 PTGER1P34995 402 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 CCNFP41002 786 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 BCL6P41182 706 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 XCR1P46094 333 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 TTPAP49638 278 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 PNLIPRP1P54315 467 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 EIF3BP55884 814 aaKnown RBP8.76□□□□□ -1.01
VCL-204ENST00000472585 PRAMEP78395 509 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 RHAGQ02094 409 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 RELAQ04206 551 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 KLHL38Q2WGJ6 581 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 EMC4Q5J8M3 183 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 TMEM211Q6ICI0 200 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 SLC25A25Q6KCM7 469 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 CLEC9AQ6UXN8 241 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 RAD9BQ6WBX8 426 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 PPP1R21Q6ZMI0 780 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 CYHR1Q6ZMK1 362 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 OTOAQ7RTW8 1153 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 CLYBLQ8N0X4 340 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 TMEM178AQ8NBL3 297 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 NUDT8Q8WV74 236 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 LPGAT1Q92604 370 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 TSLPQ969D9 159 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 LRRC45Q96CN5 670 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 TM4SF19Q96DZ7 209 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 RMND5BQ96G75 393 aaPredicted RBP8.76□□□□□ -1.01
VCL-204ENST00000472585 PRAP1Q96NZ9 151 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 ALPK1Q96QP1 1244 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 TTC1Q99614 292 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 TSSK1BQ9BXA7 367 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 CDCP1Q9H5V8 836 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 KCNK13Q9HB14 408 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 MMP25Q9NPA2 562 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 LANCL2Q9NS86 450 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 HCN3Q9P1Z3 774 aa8.76□□□□□ -1.01
VCL-204ENST00000472585 ERI2A8K979 691 aaKnown RBP8.75□□□□□ -1.01
VCL-204ENST00000472585 GABRR3A8MPY1 467 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 PRPF4O43172 522 aaKnown RBP eCLIP8.75□□□□□ -1.01
VCL-204ENST00000472585 LIASO43766 372 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 NDUFS3O75489 264 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 TOXO94900 526 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 B3GALT4O96024 378 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 EZRP15311 586 aaKnown RBP8.75□□□□□ -1.01
VCL-204ENST00000472585 IL1RNP18510 177 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 RPA3P35244 121 aaPredicted RBP8.75□□□□□ -1.01
VCL-204ENST00000472585 ANP32AP39687 249 aaKnown RBP8.75□□□□□ -1.01
VCL-204ENST00000472585 SESN2P58004 480 aaPredicted RBP8.75□□□□□ -1.01
VCL-204ENST00000472585 ADAM8P78325 824 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 TSTA3Q13630 321 aaPredicted RBP8.75□□□□□ -1.01
VCL-204ENST00000472585 TMED2Q15363 201 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 MEP1AQ16819 746 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 MINDY4Q4G0A6 757 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 ANKRD20A4Q4UJ75 823 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 SFT2D3Q587I9 215 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 PCID2Q5JVF3 399 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 TMEM198Q66K66 360 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 TMEM214Q6NUQ4 689 aaKnown RBP8.75□□□□□ -1.01
VCL-204ENST00000472585 REXO1L1PQ8IX06 675 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 CCDC170Q8IYT3 715 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 HORMAD2Q8N7B1 307 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 KCT2Q8NC54 265 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 PLPP5Q8NEB5 264 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 ACRBPQ8NEB7 543 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 OR5T3Q8NGG3 340 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 LILRB4Q8NHJ6 448 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 GOT1L1Q8NHS2 421 aaPredicted RBP8.75□□□□□ -1.01
VCL-204ENST00000472585 GIMAP7Q8NHV1 300 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 M1APQ8TC57 530 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 ELP5Q8TE02 316 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 C1orf54Q8WWF1 131 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 METTL21AQ8WXB1 218 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 PEX13Q92968 403 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 MFSD3Q96ES6 412 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 C18orf12Q96KH6 178 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 PANX3Q96QZ0 392 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 SMR3AQ99954 134 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 UTP23Q9BRU9 249 aaKnown RBP8.75□□□□□ -1.01
VCL-204ENST00000472585 ANP32EQ9BTT0 268 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms