RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 TRIM54Q9BYV2 358 aa13.07□□□□□ -0.32
LINC00173-201ENST00000470091 KCNK13Q9HB14 408 aa13.07□□□□□ -0.32
LINC00173-201ENST00000470091 EML4Q9HC35 981 aaKnown RBP13.07□□□□□ -0.32
LINC00173-201ENST00000470091 SEMA4BQ9NPR2 832 aaPredicted RBP13.07□□□□□ -0.32
LINC00173-201ENST00000470091 SPTAN1Q13813 2472 aaKnown RBP13.07□□□□□ -0.32
LINC00173-201ENST00000470091 TEX15Q9BXT5 2789 aa13.07□□□□□ -0.32
LINC00173-201ENST00000470091 OR5K3A6NET4 321 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 E2F3O00716 465 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 PPP6CO00743 305 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 CCNT2O60583 730 aaKnown RBP13.06□□□□□ -0.32
LINC00173-201ENST00000470091 ANXA5P08758 320 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 HIST1H2AGP0C0S8 130 aaPredicted RBP13.06□□□□□ -0.32
LINC00173-201ENST00000470091 MTHFD1P11586 935 aaKnown RBP13.06□□□□□ -0.32
LINC00173-201ENST00000470091 ALOX15P16050 662 aaPredicted RBP13.06□□□□□ -0.32
LINC00173-201ENST00000470091 HIST1H2ADP20671 130 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 ACADLP28330 430 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 RPL14P50914 215 aaKnown RBP13.06□□□□□ -0.32
LINC00173-201ENST00000470091 ARFIP2P53365 341 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 AP1S2P56377 157 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 RPS15P62841 145 aaKnown RBP13.06□□□□□ -0.32
LINC00173-201ENST00000470091 HSD11B2P80365 405 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 ACY1Q03154 408 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 LCP2Q13094 533 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 CHAF1BQ13112 559 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 ZSCAN26Q16670 478 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 CDKL4Q5MAI5 379 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 TCTN3Q6NUS6 607 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 CYB5D1Q6P9G0 228 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 GOLGA7Q7Z5G4 137 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 WDR75Q8IWA0 830 aaKnown RBP13.06□□□□□ -0.32
LINC00173-201ENST00000470091 ANKS4BQ8N8V4 417 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 MCOLN3Q8TDD5 553 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 MR1Q95460 341 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 HIST1H2AHQ96KK5 128 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 HIST1H2AJQ99878 128 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 H2AFJQ9BTM1 129 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 ZBTB26Q9HCK0 441 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 SEMA5BQ9P283 1151 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.06□□□□□ -0.32
LINC00173-201ENST00000470091 FIS1Q9Y3D6 152 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 PCDHGA6Q9Y5G7 932 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 TNPO3Q9Y5L0 923 aaKnown RBP13.06□□□□□ -0.32
LINC00173-201ENST00000470091 SPTBP11277 2137 aa13.06□□□□□ -0.32
LINC00173-201ENST00000470091 TLCD2A6NGC4 264 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 C21orf140B9A014 251 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 ZNF195O14628 629 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 SNUPNO95149 360 aaKnown RBP13.05□□□□□ -0.32
LINC00173-201ENST00000470091 C1orf105O95561 183 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 PDGFAP04085 211 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 SLC35G4P0C7Q5 338 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 POLR2CP19387 275 aaPredicted RBP13.05□□□□□ -0.32
LINC00173-201ENST00000470091 PTPN4P29074 926 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 GDF5P43026 501 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 CCL11P51671 97 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 GALNT1Q10472 559 aaPredicted RBP13.05□□□□□ -0.32
LINC00173-201ENST00000470091 GTF2H2Q13888 395 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 PDCD2Q16342 344 aaPredicted RBP13.05□□□□□ -0.32
LINC00173-201ENST00000470091 VWA5B1Q5TIE3 1220 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 PRAMEF17Q5VTA0 474 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 GTF2H2CQ6P1K8 395 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 UNC5DQ6UXZ4 953 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 SYVN1Q86TM6 617 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 OOSP2Q86WS3 158 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 TMEM126BQ8IUX1 230 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 TCAIMQ8N3R3 496 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 TEX9Q8N6V9 391 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 OR4E2Q8NGC2 313 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 AGAP11Q8TF27 550 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 FBXL8Q96CD0 374 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 FCRL4Q96PJ5 515 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 PKP4Q99569 1192 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 EBF4Q9BQW3 602 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 HGH1Q9BTY7 390 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 CD244Q9BZW8 370 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 MID1IP1Q9NPA3 183 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 ABCF3Q9NUQ8 709 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 SOHLH2Q9NX45 425 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 OPTCQ9UBM4 332 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 ACSL5Q9ULC5 683 aa13.05□□□□□ -0.32
LINC00173-201ENST00000470091 FARSAQ9Y285 508 aaKnown RBP13.05□□□□□ -0.32
LINC00173-201ENST00000470091 SPTBN1Q01082 2364 aaKnown RBP13.05□□□□□ -0.32
LINC00173-201ENST00000470091 NOTCH2Q04721 2471 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 A0A1B0GTL3 188 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 KLHL33A6NCF5 533 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 ARGFXA6NJG6 315 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 SLC9B1P1A6NJY1 282 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 TTLL8A6PVC2 850 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 K7EPI3 171 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 MATN2O00339 956 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 SCRG1O75711 98 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 MLYCDO95822 493 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 JUNP05412 331 aaKnown RBP13.04□□□□□ -0.32
LINC00173-201ENST00000470091 PRDX3P30048 256 aaKnown RBP13.04□□□□□ -0.32
LINC00173-201ENST00000470091 SLC6A12P48065 614 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 IDH3AP50213 366 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 NAA20P61599 178 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 ZXDCQ2QGD7 858 aaPredicted RBP13.04□□□□□ -0.32
LINC00173-201ENST00000470091 TMTC4Q5T4D3 741 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 FAM69BQ5VUD6 431 aa13.04□□□□□ -0.32
LINC00173-201ENST00000470091 CPZQ66K79 652 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms