RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 TAC3Q9UHF0 121 aa8.47□□□□□ -1.05
UBA3-208ENST00000465627 SNX11Q9Y5W9 270 aa8.47□□□□□ -1.05
UBA3-208ENST00000465627 CSNK1G3Q9Y6M4 447 aa8.47□□□□□ -1.05
UBA3-208ENST00000465627 NF1P21359 2839 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 SLC28A1O00337 649 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 FOXE1O00358 373 aaPredicted RBP8.46□□□□□ -1.06
UBA3-208ENST00000465627 UBDO15205 165 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 AQP9O43315 295 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 RSL1D1O76021 490 aaKnown RBP8.46□□□□□ -1.06
UBA3-208ENST00000465627 CBX6O95503 412 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 ETHE1O95571 254 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 CHEK2O96017 543 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 KRT6AP02538 564 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 KRT6BP04259 564 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 CHRM5P08912 532 aaPredicted RBP8.46□□□□□ -1.06
UBA3-208ENST00000465627 CDH1P12830 882 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 HSD3B1P14060 373 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 CTSEP14091 401 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 ACPPP15309 386 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 HSD3B2P26439 372 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 PRDX6P30041 224 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 HOXD12P35452 270 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 KRT6CP48668 564 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 ACADVLP49748 655 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 NEK2P51955 445 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 DIO3P55073 304 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 ERVK-8P63133 956 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 CSNK1G2P78368 415 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 EMX2Q04743 252 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 TBL3Q12788 808 aaKnown RBP8.46□□□□□ -1.06
UBA3-208ENST00000465627 CSTF3Q12996 717 aaKnown RBP8.46□□□□□ -1.06
UBA3-208ENST00000465627 GRIK2Q13002 908 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 SLBPQ14493 270 aaKnown RBP eCLIP8.46□□□□□ -1.06
UBA3-208ENST00000465627 HERC3Q15034 1050 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 TMEM26Q6ZUK4 368 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 CCDC121Q6ZUS5 278 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 SPATA19Q7Z5L4 167 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 ZFAND4Q86XD8 727 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 DDIASQ8IXT1 998 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 RBM12BQ8IXT5 1001 aaKnown RBP8.46□□□□□ -1.06
UBA3-208ENST00000465627 RNF175Q8N4F7 328 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 ANKRD53Q8N9V6 530 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 FAM181AQ8N9Y4 354 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 ZSCAN1Q8NBB4 408 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 FAM46DQ8NEK8 389 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 DEFB124Q8NES8 71 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 GPR156Q8NFN8 814 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 OR2L3Q8NG85 312 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 ZDHHC1Q8WTX9 485 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 TUBGCP3Q96CW5 907 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 CXorf40BQ96DE9 158 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 METTL2AQ96IZ6 378 aaKnown RBP8.46□□□□□ -1.06
UBA3-208ENST00000465627 MARK4Q96L34 752 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 CATSPER2Q96P56 530 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 OR2A14Q96R47 310 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 PITHD1Q9GZP4 211 aaPredicted RBP8.46□□□□□ -1.06
UBA3-208ENST00000465627 BRF2Q9HAW0 419 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 CAPN10Q9HC96 672 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 TMEM45AQ9NWC5 275 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 SIRT5Q9NXA8 310 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 SPASTQ9UBP0 616 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 SNX6Q9UNH7 406 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 TRIM33Q9UPN9 1127 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 DYRK1BQ9Y463 629 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 PCDHB11Q9Y5F2 797 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 PCDHGA11Q9Y5H2 935 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 ZFHX3Q15911 3703 aa8.46□□□□□ -1.06
UBA3-208ENST00000465627 MDC1Q14676 2089 aaKnown RBP8.45□□□□□ -1.06
UBA3-208ENST00000465627 USP9YO00507 2555 aaPredicted RBP8.45□□□□□ -1.06
UBA3-208ENST00000465627 TRBV23OR9-2A0A075B6M9 112 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 MAGEB17A8MXT2 336 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 PPM1DO15297 605 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 TNFSF14O43557 240 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 NRP2O60462 931 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 PEX11AO75192 247 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 CRCPO75575 148 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 KLHL18O94889 574 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 CEACAM1P13688 526 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 SLC2A4P14672 509 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 NCF2P19878 526 aaPredicted RBP8.45□□□□□ -1.06
UBA3-208ENST00000465627 POU3F2P20265 443 aaPredicted RBP8.45□□□□□ -1.06
UBA3-208ENST00000465627 PIK3R1P27986 724 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 CPOXP36551 454 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 PIK3CBP42338 1070 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 SCTRP47872 440 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 DHPSP49366 369 aaPredicted RBP8.45□□□□□ -1.06
UBA3-208ENST00000465627 ABATP80404 500 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 HMGCS1Q01581 520 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 CFHR1Q03591 330 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 LAPTM5Q13571 262 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 SQLEQ14534 574 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 KIR2DS3Q14952 304 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 NR1D2Q14995 579 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 GSTA3Q16772 222 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 AP5B1Q2VPB7 878 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 KIAA1614Q5VZ46 1190 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 MED27Q6P2C8 311 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 ZNF438Q7Z4V0 828 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 C17orf64Q86WR6 236 aa8.45□□□□□ -1.06
UBA3-208ENST00000465627 GKN2Q86XP6 184 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms