RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SLC13A3Q8WWT9 602 aa16.16■□□□□ 0.18
USP39-211ENST00000465282 L3HYPDHQ96EM0 354 aa16.16■□□□□ 0.18
USP39-211ENST00000465282 GBP5Q96PP8 586 aa16.16■□□□□ 0.18
USP39-211ENST00000465282 NTMT1Q9BV86 223 aa16.16■□□□□ 0.18
USP39-211ENST00000465282 GPR87Q9BY21 358 aa16.16■□□□□ 0.18
USP39-211ENST00000465282 RHBGQ9H310 441 aa16.16■□□□□ 0.18
USP39-211ENST00000465282 ADGRE2Q9UHX3 823 aa16.16■□□□□ 0.18
USP39-211ENST00000465282 KCND3Q9UK17 655 aa16.16■□□□□ 0.18
USP39-211ENST00000465282 ZMIZ1Q9ULJ6 1067 aa16.16■□□□□ 0.18
USP39-211ENST00000465282 RUVBL1Q9Y265 456 aaKnown RBP16.16■□□□□ 0.18
USP39-211ENST00000465282 STK38LQ9Y2H1 464 aa16.16■□□□□ 0.18
USP39-211ENST00000465282 TSC22D4Q9Y3Q8 395 aa16.16■□□□□ 0.18
USP39-211ENST00000465282 EPG5Q9HCE0 2579 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 URADA6NGE7 173 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 G3V2L1 256 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 CPA3P15088 417 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 ALAS2P22557 587 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 VARSP26640 1264 aaKnown RBP16.15■□□□□ 0.18
USP39-211ENST00000465282 SERPINB1P30740 379 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 DNAJB13P59910 316 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 RGS1Q08116 209 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 RBBP5Q15291 538 aaKnown RBP16.15■□□□□ 0.18
USP39-211ENST00000465282 TGIF1Q15583 401 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 HKDC1Q2TB90 917 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 ZNF678Q5SXM1 525 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 C10orf62Q5T681 223 aaPredicted RBP16.15■□□□□ 0.18
USP39-211ENST00000465282 ZNF385CQ66K41 422 aaPredicted RBP16.15■□□□□ 0.18
USP39-211ENST00000465282 GRHL2Q6ISB3 625 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 TTLL10Q6ZVT0 673 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 SPACA3Q8IXA5 215 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 ARHGEF39Q8N4T4 335 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 CCDC63Q8NA47 563 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 NT5CQ8TCD5 201 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 PPP4R1Q8TF05 950 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 ZNF483Q8TF39 744 aaPredicted RBP16.15■□□□□ 0.18
USP39-211ENST00000465282 MR1Q95460 341 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 DCBLD2Q96PD2 775 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 CCNL2Q96S94 520 aaPredicted RBP16.15■□□□□ 0.18
USP39-211ENST00000465282 SPNS1Q9H2V7 528 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 CENPHQ9H3R5 247 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 VIPAS39Q9H9C1 493 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 STARD5Q9NSY2 213 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 DHCR7Q9UBM7 475 aaKnown RBP16.15■□□□□ 0.18
USP39-211ENST00000465282 PCDHGA11Q9Y5H2 935 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 SLC22A7Q9Y694 548 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 CELSR3Q9NYQ7 3312 aa16.15■□□□□ 0.18
USP39-211ENST00000465282 CFAP47Q6ZTR5 3102 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 TEX51A0A1B0GUA7 166 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 ANKDD1BA6NHY2 528 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 C9J4A7 227 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 PRPF4O43172 522 aaKnown RBP eCLIP16.14■□□□□ 0.17
USP39-211ENST00000465282 TYROBPO43914 113 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 PRAMEF4O60810 478 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 CLEC3AO75596 197 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 CLDN9O95484 217 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 MLYCDO95822 493 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 RECKO95980 971 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 OTCP00480 354 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 SERPINA6P08185 405 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 RAB40ALP0C0E4 278 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 TCN2P20062 427 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 CCNG1P51959 295 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 SKP1P63208 163 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 ASPHQ12797 758 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 NKAIN1Q4KMZ8 207 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 PRAMEF9Q5VWM5 478 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 TMEM214Q6NUQ4 689 aaKnown RBP16.14■□□□□ 0.17
USP39-211ENST00000465282 MED27Q6P2C8 311 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 EXOC3L1Q86VI1 746 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 LAS2Q8IYD9 372 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 ANKRD53Q8N9V6 530 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 L3MBTL4Q8NA19 623 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 ATP6V1E2Q96A05 226 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 REPS1Q96D71 796 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 NAF1Q96HR8 494 aaKnown RBP16.14■□□□□ 0.17
USP39-211ENST00000465282 DRC3Q9H069 523 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 NOL11Q9H8H0 719 aaKnown RBP16.14■□□□□ 0.17
USP39-211ENST00000465282 ACTR8Q9H981 624 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 SYNPO2LQ9H987 977 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 GPN2Q9H9Y4 310 aaPredicted RBP16.14■□□□□ 0.17
USP39-211ENST00000465282 OXSMQ9NWU1 459 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 ZNF490Q9ULM2 529 aaPredicted RBP16.14■□□□□ 0.17
USP39-211ENST00000465282 PCDHGA6Q9Y5G7 932 aa16.14■□□□□ 0.17
USP39-211ENST00000465282 ZZEF1O43149 2961 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 ZFHX4Q86UP3 3567 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 LRRC14BA6NHZ5 514 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 H0YIV9 168 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 H3BQF6 201 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 P2RX6O15547 441 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 NDUFS4O43181 175 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 SUPT7LO94864 414 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 ALBP02768 609 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 STXBP1P61764 594 aaKnown RBP16.13■□□□□ 0.17
USP39-211ENST00000465282 RPS15P62841 145 aaKnown RBP16.13■□□□□ 0.17
USP39-211ENST00000465282 TLE3Q04726 772 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 CLCQ05315 142 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 HERC3Q15034 1050 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 GGTA1PQ4G0N0 100 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 HOMEZQ8IX15 550 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 TCP10LQ8TDR4 215 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms