RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SNX6Q9UNH7 406 aa9.57□□□□□ -0.88
PTPRD-207ENST00000463477 PDE10AQ9Y233 779 aa9.57□□□□□ -0.88
PTPRD-207ENST00000463477 LRRK1Q38SD2 2015 aa9.57□□□□□ -0.88
PTPRD-207ENST00000463477 ADAMTS9Q9P2N4 1935 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 RNF103-CHMP3A0A140T963 221 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 A0A1B0GTQ1 180 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 SAC3D1A6NKF1 404 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 CFAP99D6REC4 459 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 H0Y8X5 98 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 TOR1BO14657 336 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 PCDHGA12O60330 932 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 DEAF1O75398 565 aaPredicted RBP9.56□□□□□ -0.88
PTPRD-207ENST00000463477 GMNNO75496 209 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 SCELO95171 688 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 HPRP00739 348 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 PGRP06401 933 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 HIST1H2AGP0C0S8 130 aaPredicted RBP9.56□□□□□ -0.88
PTPRD-207ENST00000463477 CEACAM1P13688 526 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 ATP1B2P14415 290 aaPredicted RBP9.56□□□□□ -0.88
PTPRD-207ENST00000463477 HIST1H2ADP20671 130 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 CYP2A7P20853 494 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 VIPR1P32241 457 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 MMP12P39900 470 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 MAPK9P45984 424 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 ARHGEF7Q14155 803 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 SUZ12Q15022 739 aaKnown RBP9.56□□□□□ -0.88
PTPRD-207ENST00000463477 IMPG1Q17R60 797 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 RUNDC3AQ59EK9 446 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 LIPIQ6XZB0 460 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 B3GNT6Q6ZMB0 384 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 GCNT7Q6ZNI0 430 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 RBM44Q6ZP01 1051 aaKnown RBP9.56□□□□□ -0.88
PTPRD-207ENST00000463477 USP51Q70EK9 711 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 UBE2R2Q712K3 238 aaPredicted RBP9.56□□□□□ -0.88
PTPRD-207ENST00000463477 LIX1Q8N485 282 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 OXR1Q8N573 874 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 DTWD1Q8N5C7 304 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 ZNF548Q8NEK5 533 aaPredicted RBP9.56□□□□□ -0.88
PTPRD-207ENST00000463477 ZFP28Q8NHY6 868 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 TESCQ96BS2 214 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 METTL2AQ96IZ6 378 aaKnown RBP9.56□□□□□ -0.88
PTPRD-207ENST00000463477 HIST1H2AHQ96KK5 128 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 PPM1MQ96MI6 270 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 HIST1H2AJQ99878 128 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 SH3GL3Q99963 347 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 H2AFJQ9BTM1 129 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 C1QTNF7Q9BXJ2 289 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 UGT2B28Q9BY64 529 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 GPR27Q9NS67 375 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 ARL15Q9NXU5 204 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 TMPRSS11EQ9UL52 423 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 OAZ3Q9UMX2 235 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 CA5BQ9Y2D0 317 aa9.56□□□□□ -0.88
PTPRD-207ENST00000463477 A0A087WXM4 84 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 A0A096LPI6 279 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 POM121BA6NF01 834 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FAM220BPB1ANY3 271 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FPGTO14772 594 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 YKT6O15498 198 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CLOCKO15516 846 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 PRMT3O60678 531 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 SEC22BO75396 215 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 OR6B1O95007 311 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 KCNK5O95279 499 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 THEGLP0DJG4 465 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 BCKDHAP12694 445 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 NCK1P16333 377 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 HOXB9P17482 250 aaPredicted RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CALRP27797 417 aaKnown RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CAPGP40121 348 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CASP2P42575 452 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 GDF5P43026 501 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 DGKQP52824 942 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CLDN2P57739 230 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 C21orf58P58505 322 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 PLOD1Q02809 727 aaPredicted RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CYP4F3Q08477 520 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 SELPLGQ14242 412 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 PTGR1Q14914 329 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 DPY19L1Q2PZI1 675 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FAM174BQ3ZCQ3 159 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FAM98BQ52LJ0 330 aaKnown RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 Q6ZSR6 202 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 DPPA4Q7L190 304 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 DHRSXQ8N5I4 330 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 TRAM1L1Q8N609 369 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FAM47BQ8NA70 645 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 DDHD1Q8NEL9 900 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 OR2T12Q8NG77 320 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 OR13H1Q8NG92 308 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FBXL8Q96CD0 374 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CMTM7Q96FZ5 175 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 WRAP53Q9BUR4 548 aaKnown RBP9.55□□□□□ -0.88
PTPRD-207ENST00000463477 CHID1Q9BWS9 393 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 ACPTQ9BZG2 426 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 GRIP2Q9C0E4 1043 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 MAGIXQ9H6Y5 334 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 ACTR8Q9H981 624 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 FZD3Q9NPG1 666 aa9.55□□□□□ -0.88
PTPRD-207ENST00000463477 VAPAQ9P0L0 249 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms