RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 SMPDL3AQ92484 453 aa14.78□□□□□ -0.04
SND1-203ENST00000463020 PANX3Q96QZ0 392 aa14.78□□□□□ -0.04
SND1-203ENST00000463020 SPOCK3Q9BQ16 436 aa14.78□□□□□ -0.04
SND1-203ENST00000463020 MCCC2Q9HCC0 563 aa14.78□□□□□ -0.04
SND1-203ENST00000463020 RAB6BQ9NRW1 208 aa14.78□□□□□ -0.04
SND1-203ENST00000463020 ERI2A8K979 691 aaKnown RBP14.77□□□□□ -0.05
SND1-203ENST00000463020 F8W8V4 182 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 SGK494L7N484 410 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 TTI1O43156 1089 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 PRPF4O43172 522 aaKnown RBP eCLIP14.77□□□□□ -0.05
SND1-203ENST00000463020 PSIP1O75475 530 aaKnown RBP14.77□□□□□ -0.05
SND1-203ENST00000463020 SLC16A8O95907 504 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 APRTP07741 180 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 EZRP15311 586 aaKnown RBP14.77□□□□□ -0.05
SND1-203ENST00000463020 IL1RNP18510 177 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 CXCR5P32302 372 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 PTGER1P34995 402 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 PNLIPRP1P54315 467 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 PRDX1Q06830 199 aaKnown RBP14.77□□□□□ -0.05
SND1-203ENST00000463020 KLHL38Q2WGJ6 581 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 MFSD4BQ5TF39 518 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 C8orf74Q6P047 294 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 MEX3BQ6ZN04 569 aaKnown RBP14.77□□□□□ -0.05
SND1-203ENST00000463020 PEX26Q7Z412 305 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 KIF2BQ8N4N8 673 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 RAB42Q8N4Z0 105 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 GSDMBQ8TAX9 411 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 C1orf54Q8WWF1 131 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 NRGNQ92686 78 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 TSLPQ969D9 159 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 MFSD3Q96ES6 412 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 VIPAS39Q9H9C1 493 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 KCNK13Q9HB14 408 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 NPDC1Q9NQX5 325 aaPredicted RBP14.77□□□□□ -0.05
SND1-203ENST00000463020 ANAPC5Q9UJX4 755 aa14.77□□□□□ -0.05
SND1-203ENST00000463020 GABRR3A8MPY1 467 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 E7ENX8 843 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 E7EVH7 732 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 H7BY64 318 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 ASNA1O43681 348 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 NDUFS3O75489 264 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 ICAM2P13598 275 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 FDFT1P37268 417 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 CETN2P41208 172 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 XCR1P46094 333 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 TAP2Q03519 686 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 SNX1Q13596 522 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 CASP8Q14790 479 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 LONRF1Q17RB8 773 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 KRTAP21-3Q3LHN1 58 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 ANKRD20A4Q4UJ75 823 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 HSP90B2PQ58FF3 399 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 PCID2Q5JVF3 399 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 ADCK2Q7Z695 626 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 CPSF7Q8N684 471 aaKnown RBP14.76□□□□□ -0.05
SND1-203ENST00000463020 OR51Q1Q8NH59 317 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 RERGQ96A58 199 aaPredicted RBP14.76□□□□□ -0.05
SND1-203ENST00000463020 ZNF354BQ96LW1 612 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 PRAP1Q96NZ9 151 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 AMFRQ9UKV5 643 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 CRYL1Q9Y2S2 319 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 MED16Q9Y2X0 877 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 PCDHGB6Q9Y5F9 930 aa14.76□□□□□ -0.05
SND1-203ENST00000463020 HRNRQ86YZ3 2850 aaPredicted RBP14.75□□□□□ -0.05
SND1-203ENST00000463020 ZNF860A6NHJ4 632 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 SMAPO00193 183 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 PHF2O75151 1096 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 CDC123O75794 336 aaPredicted RBP14.75□□□□□ -0.05
SND1-203ENST00000463020 ZNF189O75820 626 aaPredicted RBP14.75□□□□□ -0.05
SND1-203ENST00000463020 SASH3O75995 380 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 VAPBO95292 243 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 GAS8O95995 478 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 SP1P08047 785 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 IGFBP2P18065 325 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 EEF1DP29692 281 aaKnown RBP14.75□□□□□ -0.05
SND1-203ENST00000463020 ATP5DP30049 168 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 RPL22P35268 128 aaKnown RBP14.75□□□□□ -0.05
SND1-203ENST00000463020 PPARGP37231 505 aaPredicted RBP14.75□□□□□ -0.05
SND1-203ENST00000463020 RFC3P40938 356 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 RHAGQ02094 409 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 CUL1Q13616 776 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 FAM53BQ14153 422 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 TYSND1Q2T9J0 566 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 KRTCAP3Q53RY4 240 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 SFT2D3Q587I9 215 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 LRRC6Q86X45 466 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 IFT20Q8IY31 132 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 RPRMLQ8N4K4 120 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 OR5T3Q8NGG3 340 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 ZCCHC10Q8TBK6 192 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 METTL21AQ8WXB1 218 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 PEX13Q92968 403 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 SDCCAG3Q96C92 435 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 FOPNLQ96NB1 174 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 UTP23Q9BRU9 249 aaKnown RBP14.75□□□□□ -0.05
SND1-203ENST00000463020 SYBUQ9NX95 663 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 TEKT2Q9UIF3 430 aa14.75□□□□□ -0.05
SND1-203ENST00000463020 NKX2-6A6NCS4 301 aa14.74□□□□□ -0.05
SND1-203ENST00000463020 RDH16O75452 317 aa14.74□□□□□ -0.05
SND1-203ENST00000463020 NSA2O95478 260 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms