RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 LOC101059948A0A1B0GTJ6 334 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 GOLGA6L10A6NI86 522 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 SRRM3A6NNA2 597 aaPredicted RBP11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 C9J4A7 227 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 P2RX6O15547 441 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 PRPF4O43172 522 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 DLX3O60479 287 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 WFS1O76024 890 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 CD63P08962 238 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 MYL2P10916 166 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 PIM1P11309 404 aaPredicted RBP11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ALAS2P22557 587 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 HPDP32754 393 aaPredicted RBP11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 HNF4AP41235 474 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 PRKAA2P54646 552 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 NAA20P61599 178 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 HERVK_113P63132 956 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 FAM53BQ14153 422 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 CASP8Q14790 479 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 RBBP5Q15291 538 aaKnown RBP11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 NKAIN1Q4KMZ8 207 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 C1orf189Q5VU69 101 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 LIPJQ5W064 366 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 GRHL2Q6ISB3 625 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ZYG11AQ6WRX3 759 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ANKRD53Q8N9V6 530 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 CCDC63Q8NA47 563 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 NT5CQ8TCD5 201 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ZNF483Q8TF39 744 aaPredicted RBP11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 CT55Q8WUE5 264 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 RNF31Q96EP0 1072 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 PKNOX2Q96KN3 472 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 MAGEB10Q96LZ2 347 aaPredicted RBP11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 C10orf90Q96M02 699 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ERVK-6Q9BXR3 956 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 GPR87Q9BY21 358 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 DRC3Q9H069 523 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 CENPHQ9H3R5 247 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 IPPKQ9H8X2 491 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ACTR8Q9H981 624 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 GPN2Q9H9Y4 310 aaPredicted RBP11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 NDOR1Q9UHB4 597 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 CROTQ9UKG9 612 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 PLLPQ9Y342 182 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ACTL7BQ9Y614 415 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 HEATR5BQ9P2D3 2071 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 USP24Q9UPU5 2620 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 EPG5Q9HCE0 2579 aa11.11□□□□□ -0.63
TRAF3IP1-204ENST00000462122 URB1O60287 2271 aaKnown RBP11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 URADA6NGE7 173 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ANKDD1BA6NHY2 528 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 LRRC14BA6NHZ5 514 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 G3V2L1 256 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 TERTO14746 1132 aaKnown RBP11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 PRAMEF4O60810 478 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 CLEC3AO75596 197 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ONECUT2O95948 504 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 SERPINA6P08185 405 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 RAB40ALP0C0E4 278 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 LIFP15018 202 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 H2AFXP16104 143 aaPredicted RBP11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 TCN2P20062 427 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 CD22P20273 847 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 IMPDH1P20839 514 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 SERPINB1P30740 379 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 DLSTP36957 453 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 CCNG1P51959 295 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 TMPRSS3P57727 454 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 RPS15P62841 145 aaKnown RBP11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 SKP1P63208 163 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 DNASE1L3Q13609 305 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 TNFAIP8L3Q5GJ75 292 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ZNF678Q5SXM1 525 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 PRAMEF9Q5VWM5 478 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 TMEM214Q6NUQ4 689 aaKnown RBP11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 NIPAL1Q6NVV3 410 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 MED27Q6P2C8 311 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 FAM198BQ6UWH4 519 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 VASH2Q86V25 355 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 LAS2Q8IYD9 372 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ARHGEF39Q8N4T4 335 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ZSCAN1Q8NBB4 408 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 PPP4R1Q8TF05 950 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 ATP6V1E2Q96A05 226 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 FKBP10Q96AY3 582 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 REPS1Q96D71 796 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 L3HYPDHQ96EM0 354 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 SLC45A3Q96JT2 553 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 TMEM237Q96Q45 408 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 NTMT1Q9BV86 223 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 CHST8Q9H2A9 424 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 RHBGQ9H310 441 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 NOL11Q9H8H0 719 aaKnown RBP11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 AKIRIN1Q9H9L7 192 aaPredicted RBP11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 SSU72Q9NP77 194 aaKnown RBP11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 IFT80Q9P2H3 777 aaPredicted RBP11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 STK38LQ9Y2H1 464 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 PCDHGA6Q9Y5G7 932 aa11.1□□□□□ -0.63
TRAF3IP1-204ENST00000462122 SLC22A7Q9Y694 548 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms