RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 BTG1P62324 171 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 EXOSC2Q13868 293 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SUZ12Q15022 739 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 DGUOKQ16854 277 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 BTBD16Q32M84 506 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ALFQ53S48 1182 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 CST9Q5W186 159 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 UNC5DQ6UXZ4 953 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 MBOAT1Q6ZNC8 495 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR155Q7Z3F1 870 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR149Q86SP6 731 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SYT9Q86SS6 491 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC5A8Q8N695 610 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ARRDC2Q8TBH0 407 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 CXorf58Q96LI9 332 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 RAD9AQ99638 391 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 PITX2Q99697 317 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 WACQ9BTA9 647 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ENKD1Q9H0I2 346 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 MOV10Q9HCE1 1003 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 NPAP1Q9NZP6 1156 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 KLK14Q9P0G3 267 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 TINAGQ9UJW2 476 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 NDRG2Q9UN36 371 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 KLHL20Q9Y2M5 609 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 LSM2Q9Y333 95 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 A0A087WV48 116 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 A0A1W2PQL4 384 aaPredicted RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ECI2O75521 394 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 TSPAN9O75954 239 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 MPOP05164 745 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SOX18P35713 384 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 NR2C2P49116 596 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 DSC1Q08554 894 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 PRKG2Q13237 762 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 PLEKHG6Q3KR16 790 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM160B1Q5W0V3 765 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 LIX1LQ8IVB5 337 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 OR8H2Q8N162 312 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 LIX1Q8N485 282 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 OR6P1Q8NGX9 317 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 CREB3L4Q8TEY5 395 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 S100ZQ8WXG8 99 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 CNOT9Q92600 299 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 BHMTQ93088 406 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 HRASLS5Q96KN8 279 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 FOPNLQ96NB1 174 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 MARVELD1Q9BSK0 173 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 KATNB1Q9BVA0 655 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 NT5C1AQ9BXI3 368 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ASPNQ9BXN1 380 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SIK2Q9H0K1 926 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 KCNN2Q9H2S1 579 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 GORASP2Q9H8Y8 452 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 DNAJB9Q9UBS3 223 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ARL5AQ9Y689 179 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 INTS1Q8N201 2190 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC35F4A4IF30 521 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 GREM1O60565 184 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 NOS1APO75052 506 aaPredicted RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 MAFO75444 373 aaPredicted RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 UGT2B17O75795 530 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 CBX7O95931 251 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 PRLP01236 227 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ALPPP05187 535 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ATXN1LP0C7T5 689 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 IGFBP5P24593 272 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 PPP3CCP48454 512 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 CSNK1DP48730 415 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC9A3P48764 834 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 DSC2Q02487 901 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 PUDPQ08623 228 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ARSKQ6UWY0 536 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 CLEC20AQ6ZU45 233 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 PRSS42Q7Z5A4 293 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 PDZD3Q86UT5 571 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ZDHHC21Q8IVQ6 265 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 CDKL3Q8IVW4 592 aaPredicted RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 TAGAPQ8N103 731 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF675Q8TD23 568 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC5A11Q8WWX8 675 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 TESCQ96BS2 214 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 NRTNQ99748 197 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 THUMPD3Q9BV44 507 aaKnown RBP4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SNTG1Q9NSN8 517 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 SEPT3Q9UH03 358 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR160Q9UJ42 338 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 ZDBF2Q9HCK1 2354 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 TNCP24821 2201 aa4.38□□□□□ -1.71
DEPDC1-202ENST00000456315 HEPACAM2A8MVW5 462 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 WNT10BO00744 389 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 RGS10O43665 173 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM20BO75063 409 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TNFRSF21O75509 655 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 DAB1O75553 588 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 KCNK5O95279 499 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 RRASP10301 218 aa4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 RPS3P23396 243 aaKnown RBP eCLIP4.37□□□□□ -1.71
DEPDC1-202ENST00000456315 TKTL1P51854 596 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms