RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ALBP02768 609 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 COL9A1P20849 921 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 CCT8P50990 548 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 ZNF763Q0D2J5 394 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 METRNLQ641Q3 311 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 OR52E8Q6IFG1 317 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 TTC33Q6PID6 262 aaPredicted RBP13.13□□□□□ -0.31
CLK3-203ENST00000454830 ZDHHC13Q8IUH4 622 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 EPHX4Q8IUS5 362 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 DHRSXQ8N5I4 330 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 HMGB4Q8WW32 186 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 EZH1Q92800 747 aaPredicted RBP13.13□□□□□ -0.31
CLK3-203ENST00000454830 ADI1Q9BV57 179 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 SGPP1Q9BX95 441 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 PRDM8Q9NQV8 689 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 FAM120CQ9NX05 1096 aaKnown RBP13.13□□□□□ -0.31
CLK3-203ENST00000454830 SUFUQ9UMX1 484 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 PRAMEF33A0A0G2JMD5 474 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 PLOD2O00469 737 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 CHI3L1P36222 383 aaPredicted RBP13.13□□□□□ -0.31
CLK3-203ENST00000454830 RPS9P46781 194 aaKnown RBP13.13□□□□□ -0.31
CLK3-203ENST00000454830 PPM1FP49593 454 aaPredicted RBP13.13□□□□□ -0.31
CLK3-203ENST00000454830 PLA2G16P53816 162 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 PPP2CBP62714 309 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 PPP2CAP67775 309 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 ABHD18Q0P651 414 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 RPA4Q13156 261 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 PYCR3Q53H96 274 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 SLC44A2Q8IWA5 706 aaPredicted RBP13.13□□□□□ -0.31
CLK3-203ENST00000454830 OR5K2Q8NHB8 316 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 SMPDL3AQ92484 453 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 ZNF597Q96LX8 424 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 CD93Q9NPY3 652 aa13.13□□□□□ -0.31
CLK3-203ENST00000454830 H0Y8X5 98 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 GNAO1P09471 354 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 TNFRSF4P43489 277 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 PLCL1Q15111 1095 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 ATP6AP1Q15904 470 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 HORMAD1Q86X24 394 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 FBXL20Q96IG2 436 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 AP3M1Q9Y2T2 418 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 AP1G1O43747 822 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 DIRAS1O95057 198 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 C6orf47O95873 294 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 ASGR2P07307 311 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 PRPH2P23942 346 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 TRPC1P48995 793 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 PRIM2P49643 509 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 ADPRHP54922 357 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 SLC30A9Q6PML9 568 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 RIMKLAQ8IXN7 391 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 FBXO15Q8NCQ5 510 aaPredicted RBP13.12□□□□□ -0.31
CLK3-203ENST00000454830 RPLP0P6Q8NHW5 317 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 CIDECQ96AQ7 238 aaPredicted RBP13.12□□□□□ -0.31
CLK3-203ENST00000454830 AHSPQ9NZD4 102 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 ACSL5Q9ULC5 683 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 FZD4Q9ULV1 537 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 POM121BA6NF01 834 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 NOBOXO60393 691 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 IGFALSP35858 605 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 RAE1P78406 368 aaKnown RBP13.12□□□□□ -0.31
CLK3-203ENST00000454830 MYBPC1Q00872 1141 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 ANXA8L1Q5VT79 327 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 TMEM184AQ6ZMB5 413 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 RASGRP3Q8IV61 690 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 HS3ST5Q8IZT8 346 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 GOLM1Q8NBJ4 401 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 DNAJB8Q8NHS0 232 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 CHTF18Q8WVB6 975 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 MAL2Q969L2 176 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 MACROD1Q9BQ69 325 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 APOOQ9BUR5 198 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 ASPSCR1Q9BZE9 553 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 ATAD3AQ9NVI7 634 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 ACSL6Q9UKU0 697 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 KLHL20Q9Y2M5 609 aa13.12□□□□□ -0.31
CLK3-203ENST00000454830 ISM1B1AKI9 464 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 hCG_2039718K7EN88 272 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 PRMT3O60678 531 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 SNAP29O95721 258 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 FUCA1P04066 466 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 IL3P08700 152 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 CCR8P51685 355 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 MERTKQ12866 999 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 LAPTM4AQ15012 233 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.11□□□□□ -0.31
CLK3-203ENST00000454830 SATL1Q86VE3 508 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 SETD7Q8WTS6 366 aaKnown RBP13.11□□□□□ -0.31
CLK3-203ENST00000454830 TSACCQ96A04 125 aaPredicted RBP13.11□□□□□ -0.31
CLK3-203ENST00000454830 RMND5BQ96G75 393 aaPredicted RBP13.11□□□□□ -0.31
CLK3-203ENST00000454830 TSC22D3Q99576 134 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 S1PR5Q9H228 398 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 RUBCNLQ9H714 662 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 SMPD3Q9NY59 655 aaPredicted RBP13.11□□□□□ -0.31
CLK3-203ENST00000454830 C5AR2Q9P296 337 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 CNOT11Q9UKZ1 510 aaKnown RBP13.11□□□□□ -0.31
CLK3-203ENST00000454830 FAF1Q9UNN5 650 aaPredicted RBP13.11□□□□□ -0.31
CLK3-203ENST00000454830 MAP4K5Q9Y4K4 846 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 A0A1B0GTW7 788 aa13.11□□□□□ -0.31
CLK3-203ENST00000454830 YY2O15391 372 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms