RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 OR9A1PQ8NGU1 263 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 EXT2Q93063 718 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 FAM111AQ96PZ2 611 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 ATOH8Q96SQ7 321 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 ACAT2Q9BWD1 397 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 CLMPQ9H6B4 373 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 ARL15Q9NXU5 204 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 IFT80Q9P2H3 777 aaPredicted RBP16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 CPSF2Q9P2I0 782 aaKnown RBP16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 NDOR1Q9UHB4 597 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 ANAPC2Q9UJX6 822 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 PDE10AQ9Y233 779 aa16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 PTRH2Q9Y3E5 179 aaKnown RBP16.29■□□□□ 0.2
PRPF40A-204ENST00000450303 A6NL46 340 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 CTSVO60911 334 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 CNOT3O75175 753 aaKnown RBP16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 KLF7O75840 302 aaPredicted RBP16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 GUCA1CO95843 209 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 MYL2P10916 166 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 GFAPP14136 432 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 CHN1P15882 459 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 CASRP41180 1078 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 HNMTP50135 292 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 ASPHQ12797 758 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 KLRB1Q12918 225 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 ATP1A4Q13733 1029 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 IGFBP7Q16270 282 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 NKAIN1Q4KMZ8 207 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 ZC3H12BQ5HYM0 836 aaKnown RBP16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 HHATQ5VTY9 493 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 SULT1C3Q6IMI6 304 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 SUSD1Q6UWL2 747 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 SLC22A9Q8IVM8 553 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 ANKRD42Q8N9B4 389 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 TEX19Q8NA77 164 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 ARMC2Q8NEN0 867 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 OR2A1Q8NGT9 310 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 PROKR1Q8TCW9 393 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 ZNF473Q8WTR7 871 aaKnown RBP16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 CCT8L2Q96SF2 557 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 PKP4Q99569 1192 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 UTP6Q9NYH9 597 aaKnown RBP16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 SPATA7Q9P0W8 599 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 PRDM4Q9UKN5 801 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 IKZF3Q9UKT9 509 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 SRPK3Q9UPE1 567 aa16.28■□□□□ 0.2
PRPF40A-204ENST00000450303 A0A0J9YVX5 310 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 MYO1CO00159 1063 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 CPA3P15088 417 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 ATP5F1P24539 256 aaPredicted RBP16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 VSX2P58304 361 aaPredicted RBP16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 CYP2A13Q16696 494 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 PHKG1Q16816 387 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 PPP1R3AQ16821 1122 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 FRMPD2BQ6IN97 320 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 CPLX4Q7Z7G2 160 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 DTWD1Q8N5C7 304 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 METTL27Q8N6F8 245 aaPredicted RBP16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 PPFIBP2Q8ND30 876 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 OR2L3Q8NG85 312 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 HMGCLL1Q8TB92 370 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 DLG3Q92796 817 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 ZUFSPQ96AP4 578 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 CHMP6Q96FZ7 201 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 SLC25A23Q9BV35 468 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 SLC22A11Q9NSA0 550 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 ABCF3Q9NUQ8 709 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 SLC17A7Q9P2U7 560 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 EMCNQ9ULC0 261 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 PADI2Q9Y2J8 665 aa16.27■□□□□ 0.2
PRPF40A-204ENST00000450303 MYO18BQ8IUG5 2567 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 NCF1BA6NI72 391 aaPredicted RBP16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 NCF1CA8MVU1 366 aaPredicted RBP16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 TARM1B6A8C7 271 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 UBXN8O00124 270 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 NEFHP12036 1026 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 NCF1P14598 390 aaPredicted RBP16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 ITGAXP20702 1163 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 FOLR3P41439 243 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 GCGRP47871 477 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 KCNC1P48547 511 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 PRKAA2P54646 552 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 ALDH18A1P54886 795 aaKnown RBP16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 ARHGAP19Q14CB8 494 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 ZYG11AQ6WRX3 759 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 RAB43Q86YS6 212 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 PDPRQ8NCN5 879 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 FBXL8Q96CD0 374 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 PAIP2Q9BPZ3 127 aaKnown RBP16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 C17orf62Q9BQA9 187 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 SLC6A20Q9NP91 592 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 CUTCQ9NTM9 273 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 WWOXQ9NZC7 414 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 STOX2Q9P2F5 926 aaPredicted RBP16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 COPG2Q9UBF2 871 aa16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 TNPO3Q9Y5L0 923 aaKnown RBP16.26■□□□□ 0.19
PRPF40A-204ENST00000450303 LOC105369274A0A096LPK9 316 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 LOC102723532A0A0G2JNH3 316 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 MASP2O00187 686 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms