RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 A0A1W2PNU3 283 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 ANKDD1BA6NHY2 528 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 PDYNP01213 254 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 KITP10721 976 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 UROSP10746 265 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 AHRP35869 848 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 ETV5P41161 510 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 IFT88Q13099 833 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 TUBB3Q13509 450 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 HKDC1Q2TB90 917 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 WASHC2DQ5SRD0 308 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 KANK2Q63ZY3 851 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 FRG2Q64ET8 278 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 FOXR1Q6PIV2 292 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 RAB11FIP2Q7L804 512 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 ASPGQ86U10 573 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 TMPRSS12Q86WS5 348 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 CLYBLQ8N0X4 340 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 ZNF473Q8WTR7 871 aaKnown RBP17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 SELENOMQ8WWX9 145 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 RERGQ96A58 199 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 ZNF501Q96CX3 271 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 THAP11Q96EK4 314 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 LIN37Q96GY3 246 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 FRG2BQ96QU4 278 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 RHBGQ9H310 441 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 ELOVL6Q9H5J4 265 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 APMAPQ9HDC9 416 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 IRAK4Q9NWZ3 460 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 ZFP69BQ9UJL9 534 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 HAO1Q9UJM8 370 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 SNX6Q9UNH7 406 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 PTGDR2Q9Y5Y4 395 aa17.18■□□□□ 0.34
TRAPPC4-203ENST00000447216 CCDC187A0A096LP49 1063 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 SKAP2O75563 359 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 KRT6AP02538 564 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 KRT6BP04259 564 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 FGF4P08620 206 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 ITIH1P19827 911 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 KRT6CP48668 564 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 RPL14P50914 215 aaKnown RBP17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 RPS13P62277 151 aaKnown RBP17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 ACY1Q03154 408 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 PUM1Q14671 1186 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 ABRAXAS2Q15018 415 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 CRLF3Q8IUI8 442 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 CSNK1A1LQ8N752 337 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 BMPERQ8N8U9 685 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 CREB3L4Q8TEY5 395 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 SLC13A3Q8WWT9 602 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 REPS1Q96D71 796 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 CMKLR1Q99788 373 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 CTRCQ99895 268 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 AICDAQ9GZX7 198 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 CCDC134Q9H6E4 229 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 DMRT3Q9NQL9 472 aa17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 AKAP7Q9P0M2 348 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC4-203ENST00000447216 MAGEB17A8MXT2 336 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 NDUFS4O43181 175 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 SNUPNO95149 360 aaKnown RBP17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 TBX6O95947 436 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 TGFB1P01137 390 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 MAPK10P53779 464 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 SNRPNP63162 240 aaKnown RBP17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 MC2RQ01718 297 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 PDCD2Q16342 344 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 UGT3A2Q3SY77 523 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 C3orf38Q5JPI3 329 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 TOR1AIP1Q5JTV8 583 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 PRAMEF17Q5VTA0 474 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 TMPRSS7Q7RTY8 843 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 KCT2Q8NC54 265 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 TRPV3Q8NET8 790 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 TTLQ8NG68 377 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 TWIST2Q8WVJ9 160 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 PMEPA1Q969W9 287 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 TM4SF19Q96DZ7 209 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 C7orf26Q96N11 449 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 ZNF285Q96NJ3 590 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 TUBB1Q9H4B7 451 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 KLHL31Q9H511 634 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 FANCEQ9HB96 536 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 SLC39A1Q9NY26 324 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 PISDQ9UG56 409 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 DNAJC15Q9Y5T4 150 aa17.16■□□□□ 0.34
TRAPPC4-203ENST00000447216 PIP5K1BO14986 540 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 SRPX2O60687 465 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 ULK1O75385 1050 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 CLEC3AO75596 197 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 OR2B3O76000 313 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 ETHE1O95571 254 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 JUNP05412 331 aaKnown RBP17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 VIMP08670 466 aaKnown RBP17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 MSL3P1P0C860 447 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 HNRNPH1P31943 449 aaKnown RBP17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 PIK3CBP42338 1070 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 ITGA1P56199 1179 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 GNGT1P63211 74 aa17.15■□□□□ 0.34
TRAPPC4-203ENST00000447216 HYAL2Q12891 473 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms