RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 C11orf96Q7Z7L8 435 aa13.61□□□□□ -0.23
NCLP1-201ENST00000445357 GOT1L1Q8NHS2 421 aaPredicted RBP13.61□□□□□ -0.23
NCLP1-201ENST00000445357 FBLIM1Q8WUP2 373 aa13.61□□□□□ -0.23
NCLP1-201ENST00000445357 SLC5A11Q8WWX8 675 aa13.61□□□□□ -0.23
NCLP1-201ENST00000445357 C12orf43Q96C57 262 aaKnown RBP13.61□□□□□ -0.23
NCLP1-201ENST00000445357 NRBF2Q96F24 287 aa13.61□□□□□ -0.23
NCLP1-201ENST00000445357 SAMD11Q96NU1 681 aa13.61□□□□□ -0.23
NCLP1-201ENST00000445357 ZDHHC5Q9C0B5 715 aa13.61□□□□□ -0.23
NCLP1-201ENST00000445357 ZNF282Q9UDV7 671 aaPredicted RBP13.61□□□□□ -0.23
NCLP1-201ENST00000445357 EBF1Q9UH73 591 aa13.61□□□□□ -0.23
NCLP1-201ENST00000445357 ORC6Q9Y5N6 252 aa13.61□□□□□ -0.23
NCLP1-201ENST00000445357 GNG14A0A1W2PPG7 69 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 PLK4O00444 970 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 DPM1O60762 260 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 FABP3P05413 133 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 RYKP34925 604 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 POLR2IP36954 125 aaKnown RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 RPS6KA3P51812 740 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 ISL1P61371 349 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 PPP1R8Q12972 351 aaKnown RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 GAB1Q13480 694 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 PDE7AQ13946 482 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 STARD3Q14849 445 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 SKIV2LQ15477 1246 aaKnown RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 NXPE4Q6UWF7 544 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 ARMCX6Q7L4S7 300 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 TRMT11Q7Z4G4 463 aaKnown RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 RBM23Q86U06 439 aaKnown RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 C12orf76Q8N812 135 aaPredicted RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 GPR156Q8NFN8 814 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 OR10Q1Q8NGQ4 319 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 SETD7Q8WTS6 366 aaKnown RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 RAB7BQ96AH8 199 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 COX14Q96I36 57 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 OR52A5Q9H2C5 316 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 REEP4Q9H6H4 257 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 LIN28AQ9H9Z2 209 aaKnown RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 CCDC177Q9NQR7 707 aaPredicted RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 DYRK4Q9NR20 520 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 OBP2AQ9NY56 170 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 TMEM9Q9P0T7 183 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 FZD4Q9ULV1 537 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 VPS4AQ9UN37 437 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 CDC14AQ9UNH5 594 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 ABCG2Q9UNQ0 655 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 CEP290O15078 2479 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 B4GAT1O43505 415 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 SH3BGRLO75368 114 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 CDK4P11802 303 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 IL7RP16871 459 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 FPR1P21462 350 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 PRKACGP22612 351 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 DNAJA1P31689 397 aaKnown RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 PCGF2P35227 344 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 RPL3P39023 403 aaKnown RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 PIK3CBP42338 1070 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 ITGA1P56199 1179 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 CD47Q08722 323 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 RPA4Q13156 261 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 PDGFRLQ15198 375 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 HIST2H2ACQ16777 129 aaPredicted RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 CTU2Q2VPK5 515 aaKnown RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 HIST2H2AA3Q6FI13 130 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 ADAMTSL4Q6UY14 1074 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 CHST15Q7LFX5 561 aaPredicted RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 R3HCC1LQ7Z5L2 792 aaKnown RBP13.6□□□□□ -0.23
NCLP1-201ENST00000445357 ADGRD2Q7Z7M1 963 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 OR13F1Q8NGS4 319 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 HSH2DQ96JZ2 352 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 HDAC8Q9BY41 377 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 MYNNQ9NPC7 610 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 BLOC1S6Q9UL45 172 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 U3KQV3 271 aa13.6□□□□□ -0.23
NCLP1-201ENST00000445357 C1QTNF3-AMACRE9PGA6 284 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 H3BMQ9 156 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 PI15O43692 258 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 IGFBP5P24593 272 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 TPD52P55327 224 aaPredicted RBP13.59□□□□□ -0.23
NCLP1-201ENST00000445357 NUP107P57740 925 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 VLDLRP98155 873 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 TUBA3CQ13748 450 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 NFE2L1Q14494 772 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 C16orf72Q14CZ0 275 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 RGNQ15493 299 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 ZNF385BQ569K4 471 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 AP1ARQ63HQ0 302 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 LAIR2Q6ISS4 152 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 CRTC3Q6UUV7 619 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 LCTLQ6UWM7 567 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 TMC5Q6UXY8 1006 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 FAM83HQ6ZRV2 1179 aaPredicted RBP13.59□□□□□ -0.23
NCLP1-201ENST00000445357 CEP68Q76N32 757 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 COMMD6Q7Z4G1 85 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 DSG4Q86SJ6 1040 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 PDZD3Q86UT5 571 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 CYP4Z1Q86W10 505 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 METTL4Q8N3J2 472 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 PIK3C3Q8NEB9 887 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 CXorf40AQ8TE69 158 aa13.59□□□□□ -0.23
NCLP1-201ENST00000445357 SNX19Q92543 992 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms