RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 EID3Q8N140 333 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 MARVELD2Q8N4S9 558 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 NATD1Q8N6N6 113 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 OR7A2PQ8NGA2 310 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 FIG4Q92562 907 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 GFM2Q969S9 779 aaKnown RBP12.65□□□□□ -0.38
CPSF4-206ENST00000441580 ZNF764Q96H86 408 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-206ENST00000441580 EGLN2Q96KS0 407 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 ZNF597Q96LX8 424 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 CAMK1GQ96NX5 476 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 MYOCQ99972 504 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 INPP5KQ9BT40 448 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 OSBPL11Q9BXB4 747 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 MS4A8Q9BY19 250 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 SPNS1Q9H2V7 528 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 TTYH1Q9H313 450 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-206ENST00000441580 UBE2ZQ9H832 354 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-206ENST00000441580 OLAHQ9NV23 265 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 USP36Q9P275 1121 aaKnown RBP12.65□□□□□ -0.38
CPSF4-206ENST00000441580 VPS4AQ9UN37 437 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 WDR37Q9Y2I8 494 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 AP4B1Q9Y6B7 739 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 COLEC10Q9Y6Z7 277 aa12.65□□□□□ -0.38
CPSF4-206ENST00000441580 A0A1W2PPV9 198 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 LATO43561 262 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 SCN2BO60939 215 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 DEAF1O75398 565 aaPredicted RBP12.64□□□□□ -0.39
CPSF4-206ENST00000441580 SEMA4FO95754 770 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 PIM1P11309 404 aaPredicted RBP12.64□□□□□ -0.39
CPSF4-206ENST00000441580 GABRG2P18507 467 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 GRK3P35626 688 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 CDKN2CP42773 168 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 CCT8P50990 548 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 CCR5P51681 352 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 FOLH1Q04609 750 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 CHRNB3Q05901 458 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 LRRC32Q14392 662 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 RBBP5Q15291 538 aaKnown RBP12.64□□□□□ -0.39
CPSF4-206ENST00000441580 MLF2Q15773 248 aaPredicted RBP12.64□□□□□ -0.39
CPSF4-206ENST00000441580 RPE65Q16518 533 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 KHDRBS2Q5VWX1 349 aaKnown RBP12.64□□□□□ -0.39
CPSF4-206ENST00000441580 CHRDL2Q6WN34 429 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 GCNT7Q6ZNI0 430 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 GPR155Q7Z3F1 870 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 VN1R5Q7Z5H4 357 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 SLC9B2Q86UD5 537 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 NUDT13Q86X67 352 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 TRIML2Q8N7C3 387 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 OR4K1Q8NGD4 311 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 NUDT8Q8WV74 236 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 BIRC7Q96CA5 298 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 PPCDCQ96CD2 204 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 COQ8BQ96D53 544 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 PDXPQ96GD0 296 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 PHF12Q96QT6 1004 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 BDH2Q9BUT1 245 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 ACAT2Q9BWD1 397 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 SEMA6AQ9H2E6 1030 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 RAD21L1Q9H4I0 556 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 IKZF5Q9H5V7 419 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 PDP2Q9P2J9 529 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 LIMD1Q9UGP4 676 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 ADAM29Q9UKF5 820 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 DMTF1Q9Y222 760 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 MYO9BQ13459 2157 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 LRP4O75096 1905 aa12.64□□□□□ -0.39
CPSF4-206ENST00000441580 CEP290O15078 2479 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 TRBC2A0A5B9 178 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 ARHGAP10A1A4S6 786 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 NDUFS4O43181 175 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 TBX19O60806 448 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 CLEC3AO75596 197 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 TGFB1P01137 390 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 FURINP09958 794 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 LAMP1P11279 417 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 ZNF26P17031 533 aaPredicted RBP12.63□□□□□ -0.39
CPSF4-206ENST00000441580 GZMMP51124 257 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 DGKEP52429 567 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 MEF2AQ02078 507 aaPredicted RBP12.63□□□□□ -0.39
CPSF4-206ENST00000441580 PDK3Q15120 406 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 CPZQ66K79 652 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 FAM71E1Q6IPT2 247 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 PPP4R4Q6NUP7 873 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 TMEM92Q6UXU6 159 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 ZBTB49Q6ZSB9 765 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 AMIGO2Q86SJ2 522 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 ST13P4Q8IZP2 240 aaPredicted RBP12.63□□□□□ -0.39
CPSF4-206ENST00000441580 SYNPOQ8N3V7 929 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 MFSD2AQ8NA29 543 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 LINC01555Q8NAE3 123 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 OR52E1Q8NGJ3 308 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.63□□□□□ -0.39
CPSF4-206ENST00000441580 C16orf78Q8WTQ4 265 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 OR1E3Q8WZA6 343 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 GATA6Q92908 595 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 SLC47A1Q96FL8 570 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 RNF145Q96MT1 663 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 OR51B5Q9H339 312 aa12.63□□□□□ -0.39
CPSF4-206ENST00000441580 PIF1Q9H611 641 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms