RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ADNPQ9H2P0 1102 aa13.4□□□□□ -0.26
PTCHD3-201ENST00000438700 K7EQS6 105 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 RFXANKO14593 260 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 KPNA5O15131 536 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 MID1O15344 667 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 ERN1O75460 977 aaKnown RBP13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 CREG1O75629 220 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 PRSS23O95084 383 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 PRPS2P11908 318 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 DRD3P35462 400 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 BDKRB1P46663 353 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 TMED10P49755 219 aaKnown RBP13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 GRSF1Q12849 480 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 ENPP2Q13822 863 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 CCNYL2Q5T2Q4 361 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 NOXRED1Q6NXP6 359 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 SPESP1Q6UW49 350 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 OR7A2PQ8NGA2 310 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 CXorf40AQ8TE69 158 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 SDCCAG3Q96C92 435 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 ITCHQ96J02 903 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 SLX1AQ9BQ83 275 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 DGCR6LQ9BY27 220 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 KCNH6Q9H252 994 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 RMND5AQ9H871 391 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 A0A096LPI6 279 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 CLPXO76031 633 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 CPNE6O95741 557 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 THRBP10828 461 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 PTPN6P29350 595 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 GPR1P46091 355 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 PLA2G16P53816 162 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 IFITM3Q01628 133 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 NAE1Q13564 534 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 CST6Q15828 149 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 TRIM16LQ309B1 348 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 DOK6Q6PKX4 331 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 ZNF765Q7L2R6 523 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 GALNT13Q8IUC8 556 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 TMCO5AQ8N6Q1 288 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 ABHD11Q8NFV4 315 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 TMEM159Q96B96 161 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 RSPH9Q9H1X1 276 aaPredicted RBP13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 TOR3AQ9H497 397 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 DAPK2Q9UIK4 370 aa13.39□□□□□ -0.27
PTCHD3-201ENST00000438700 QSOX1O00391 747 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 NOL3O60936 208 aaKnown RBP13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 ATG13O75143 517 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 SLCO2B1O94956 709 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 SCELO95171 688 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 JUPP14923 745 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 PRKACGP22612 351 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 TTKP33981 857 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 KIR2DL1P43626 348 aaPredicted RBP13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 PRLHRP49683 370 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 CAMK2GQ13555 558 aaPredicted RBP13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 LRIF1Q5T3J3 769 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 ATG9BQ674R7 924 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 TTC23LQ6PF05 361 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 TMEM220Q6QAJ8 160 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 ZNF551Q7Z340 670 aaPredicted RBP13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 R3HCC1LQ7Z5L2 792 aaKnown RBP13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 GALNT10Q86SR1 603 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 THOC6Q86W42 341 aaKnown RBP13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 SYT12Q8IV01 421 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 RAB7BQ96AH8 199 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 REXO4Q9GZR2 422 aaKnown RBP13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 DCAF13Q9NV06 445 aaKnown RBP13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 DNAJB9Q9UBS3 223 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 TRPM6Q9BX84 2022 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 A8MU76 341 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 FAM220BPB1ANY3 271 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 ANHXE9PGG2 379 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 SLC16A5O15375 505 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 SEC14L2O76054 403 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 SLC16A8O95907 504 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 GSTM1P09488 218 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 MAPK1P28482 360 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 PDHA2P29803 388 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 KIR3DL1P43629 444 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 RAD23AP54725 363 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 VAC14Q08AM6 782 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 SPIDRQ14159 915 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 AGBL4Q5VU57 503 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 GTF2IRD2BQ6EKJ0 949 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 GTF2IRD2Q86UP8 949 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 SLC7A5P1Q8MH63 180 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 CADM3Q8N126 398 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 PARP8Q8N3A8 854 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 PNPT1Q8TCS8 783 aaKnown RBP13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 TESCQ96BS2 214 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 NECTIN4Q96NY8 510 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 ING2Q9H160 280 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 OR2AG1Q9H205 316 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 EXD2Q9NVH0 621 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 WARS2Q9UGM6 360 aaKnown RBP13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 PSME2Q9UL46 239 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 MAN2B2Q9Y2E5 1009 aa13.38□□□□□ -0.27
PTCHD3-201ENST00000438700 E2F6O75461 281 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms