RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PPM1HQ9ULR3 514 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 DFNA5O60443 496 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 SRCP12931 536 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ADAMTS18Q8TE60 1221 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 KCNA7Q96RP8 456 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ERI3O43414 337 aaKnown RBP11.17□□□□□ -0.62
PTCH1-208ENST00000430669 SYN1P17600 705 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 TIA1P31483 386 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTCH1-208ENST00000430669 SDC2P34741 201 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 NANOGP8Q6NSW7 305 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 SLC34A3Q8N130 599 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 FAM156AQ8NDB6 213 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 SLC12A9Q9BXP2 914 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 NANOGQ9H9S0 305 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 LOC100130705A0A1B0GUX0 176 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 RASAL1O95294 804 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ALAS2P22557 587 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ETV4P43268 484 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 IQCCQ4KMZ1 466 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 PAQR9Q6ZVX9 377 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 USP43Q70EL4 1123 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 PCTPQ9UKL6 214 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 SDK1Q7Z5N4 2213 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 hCG_2039718K7EN88 272 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 C1GALT1C1LP0DN25 315 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 PRKAR1AP10644 381 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 SMSP52788 366 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 BNC1Q01954 994 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 SEMG2Q02383 582 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 KCNC4Q03721 635 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 ZNF598Q86UK7 904 aaKnown RBP11.16□□□□□ -0.62
PTCH1-208ENST00000430669 HEATR4Q86WZ0 1026 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 MRPL43Q8N983 215 aaKnown RBP11.16□□□□□ -0.62
PTCH1-208ENST00000430669 MARCH4Q9P2E8 410 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-208ENST00000430669 HOXA9P31269 272 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 TBPL1P62380 186 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.16□□□□□ -0.62
PTCH1-208ENST00000430669 PDLIM5Q96HC4 596 aaKnown RBP11.16□□□□□ -0.62
PTCH1-208ENST00000430669 NDC1Q9BTX1 674 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 KLHL25Q9H0H3 589 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 MTX2O75431 263 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 PRAMEF12O95522 483 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 H1F0P07305 194 aaKnown RBP11.16□□□□□ -0.62
PTCH1-208ENST00000430669 ENDOUP21128 410 aaKnown RBP11.16□□□□□ -0.62
PTCH1-208ENST00000430669 RABIFP47224 123 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 CLDN8P56748 225 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 CST6Q15828 149 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 ZCCHC10Q8TBK6 192 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.16□□□□□ -0.62
PTCH1-208ENST00000430669 TGFBR2P37173 567 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 XKP51811 444 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 RUNX3Q13761 415 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 RAB6CQ53S08 254 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 WDR45BQ5MNZ6 344 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 ASRGL1Q7L266 308 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 TMIEQ8NEW7 156 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 CANT1Q8WVQ1 401 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 RAB6CQ9H0N0 254 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 AIG1Q9NVV5 245 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 DKK3Q9UBP4 350 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 SERPINA3P01011 423 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 CD70P32970 193 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 TOMM20Q15388 145 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 KCTD8Q6ZWB6 473 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 TPT1P8Q9HAU6 139 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 IFT52Q9Y366 437 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 TESMINQ9Y4I5 508 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 HHLA1C9JL84 531 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 ITGBL1O95965 494 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-208ENST00000430669 RCVRNP35243 200 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 GRM2Q14416 872 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 PTPRCAPQ14761 206 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 ELOCQ15369 112 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 CCDC157Q569K6 752 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 ZNF57Q68EA5 555 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-208ENST00000430669 RPL13AP3Q6NVV1 102 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 Q6ZVL8 140 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 BNIPLQ7Z465 357 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 PLPP6Q8IY26 295 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 ZNF483Q8TF39 744 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-208ENST00000430669 CLSTN3Q9BQT9 956 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 ABI3Q9P2A4 366 aa11.16□□□□□ -0.62
PTCH1-208ENST00000430669 C9JVG2 144 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 EI24O14681 340 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 TRIM3O75382 744 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-208ENST00000430669 DRD2P14416 443 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 MATN1P21941 496 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 NTSR1P30989 418 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 CDK6Q00534 326 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 ATP1A4Q13733 1029 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 SLC2A7Q6PXP3 512 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 FAM174AQ8TBP5 190 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 GPR151Q8TDV0 419 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 KXD1Q9BQD3 176 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 ZNF451Q9Y4E5 1061 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 C6P13671 934 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 SLC6A4P31645 630 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 INHBCP55103 352 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 FCHO2Q0JRZ9 810 aa11.15□□□□□ -0.62
PTCH1-208ENST00000430669 TUBA3CQ13748 450 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms