RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ANXA3P12429 323 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 MYCLP1P12525 358 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 CRISP1P54107 249 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 FAM214AQ32MH5 1076 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 KIAA0930Q6ICG6 404 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 MINDY2Q8NBR6 621 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 TRIB2Q92519 343 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 PLCL2Q9UPR0 1127 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ADAM18Q9Y3Q7 739 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 GPR89AB7ZAQ6 455 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 RNF13O43567 381 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ENTPD6O75354 484 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 KLK1P06870 262 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 GPR89BP0CG08 455 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 RAP2AP10114 183 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ITPRIPL2Q3MIP1 535 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ARSKQ6UWY0 536 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 OR10G2Q8NGC3 310 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 GEMIN6Q8WXD5 167 aaKnown RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 POLR2J2Q9GZM3 115 aaKnown RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 FLRT1Q9NZU1 646 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 COMMD3Q9UBI1 195 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 DNAJB9Q9UBS3 223 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 KCNS2Q9ULS6 477 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 SLC7A11Q9UPY5 501 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 WASF2Q9Y6W5 498 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 H3BNX3 289 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 TLR4O00206 839 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 HAS3O00219 553 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 DNM1LO00429 736 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ZBTB22O15209 634 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 MMP20O60882 483 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 OAZ2O95190 189 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 OAS1P00973 400 aaKnown RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 SYPP08247 313 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 MATN1P21941 496 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 CFL1P23528 166 aaKnown RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 MYLK3Q32MK0 819 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ZNF283Q8N7M2 679 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 CITED4Q96RK1 184 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 USP29Q9HBJ7 922 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 TRIM36Q9NQ86 728 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 SQORQ9Y6N5 450 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 POP7O75817 140 aaKnown RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 PRKCGP05129 697 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 HTR1AP08908 422 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 PEPDP12955 493 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 SMSP52788 366 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 AP2S1P53680 142 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 RPL6Q02878 288 aaKnown RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 PRRT3Q5FWE3 981 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 LPCAT4Q643R3 524 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 CDCA2Q69YH5 1023 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 FSTL4Q6MZW2 842 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 OR2AP1Q8NGE2 309 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 SMARCD2Q92925 531 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 HBEGFQ99075 208 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 GORASP1Q9BQQ3 440 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 EHD1Q9H4M9 534 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 KAT8Q9H7Z6 458 aaKnown RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 SLCO1B3Q9NPD5 702 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 HPF1Q9NWY4 346 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ZNF69Q9UC07 566 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 PRODH2Q9UF12 536 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 HCN2Q9UL51 889 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 FZD4Q9ULV1 537 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 POFUT2Q9Y2G5 429 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 COQ4Q9Y3A0 265 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 CLDN25C9JDP6 229 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ACOT7O00154 380 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 SOX1O00570 391 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 RAD51DO75771 328 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ARL6IP5O75915 188 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ST3GAL3Q11203 375 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 DSG2Q14126 1118 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 PITRM1Q5JRX3 1037 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 TMEM225Q6GV28 225 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 FOXRED2Q8IWF2 684 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 RASGEF1CQ8N431 466 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 C16orf58Q96GQ5 468 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ZC3H10Q96K80 434 aaKnown RBP8.68□□□□□ -1.02
CTNND1-208ENST00000428599 KCTD7Q96MP8 289 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 AP1S3Q96PC3 154 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ARHGAP39Q9C0H5 1083 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 ACSS2Q9NR19 701 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 GRHL1Q9NZI5 618 aa8.68□□□□□ -1.02
CTNND1-208ENST00000428599 TCRBV7S2A1N4TA0A589 114 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 TCRBV21S2A2A0A5A6 115 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 C2orf74A8MZ97 194 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 BLOC1S5-TXNDC5H3BN57 136 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 MAN2B1O00754 1011 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 TBX18O95935 607 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 ITGB1P05556 798 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 H1F0P07305 194 aaKnown RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 RPS15P62841 145 aaKnown RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SEMG2Q02383 582 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 BNIP3Q12983 259 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 LAS2Q8IYD9 372 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 CBR4Q8N4T8 237 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms