RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 TP53INP1Q96A56 240 aa10.41□□□□□ -0.74
ATP2C1-204ENST00000428331 C2orf49Q9BVC5 232 aaPredicted RBP10.41□□□□□ -0.74
ATP2C1-204ENST00000428331 DNMT3BQ9UBC3 853 aaKnown RBP10.41□□□□□ -0.74
ATP2C1-204ENST00000428331 SLC22A14Q9Y267 594 aa10.41□□□□□ -0.74
ATP2C1-204ENST00000428331 FCF1Q9Y324 198 aaKnown RBP10.41□□□□□ -0.74
ATP2C1-204ENST00000428331 HCN4Q9Y3Q4 1203 aa10.41□□□□□ -0.74
ATP2C1-204ENST00000428331 TRBV5-3A0A0A0MS03 114 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 RGS13O14921 159 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 GUCY1B2O75343 617 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 GADD45GO95257 159 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 SPNP16150 400 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 TNFSF8P32971 234 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 GJA5P36382 358 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 TIGARQ9NQ88 270 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 CCL27Q9Y4X3 112 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 FABP12A6NFH5 140 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 KMOO15229 486 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 SMARCB1Q12824 385 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 CCDC85BQ15834 202 aaPredicted RBP10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 CDKL4Q5MAI5 379 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 FAHD1Q6P587 224 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 KLHDC9Q8NEP7 349 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 UBTD2Q8WUN7 234 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 CLP1Q92989 425 aaKnown RBP10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 MTERF1Q99551 399 aaKnown RBP10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 CCM2Q9BSQ5 444 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 POLR2J2Q9GZM3 115 aaKnown RBP10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 SERHLQ9NQF3 203 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 PRDM8Q9NQV8 689 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 SEC14L4Q9UDX3 406 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 RAB23Q9ULC3 237 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 LRFN2Q9ULH4 789 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 ANGPT4Q9Y264 503 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 AP1M2Q9Y6Q5 423 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 SH3D21A4FU49 640 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 A6NL46 340 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 M0R082 166 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 PTHP01270 115 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 ZNF865P0CJ78 1059 aaPredicted RBP10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 SERPINA4P29622 427 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 NCEH1Q6PIU2 408 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 FAM92BQ6ZTR7 304 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 CHST9Q7L1S5 443 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 CLECL1Q8IZS7 167 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 CYP4Z2PQ8N1L4 340 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 SUN5Q8TC36 379 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 MED8Q96G25 268 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 TTYH2Q9BSA4 534 aa10.4□□□□□ -0.74
ATP2C1-204ENST00000428331 KPNA5O15131 536 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 TBL1XO60907 577 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 CR2P20023 1033 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 MZF1P28698 734 aaPredicted RBP10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 HOXA9P31269 272 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 HTR3AP46098 478 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 ELAVL2Q12926 359 aaKnown RBP10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 TP53BP2Q13625 1128 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 SYTL3Q4VX76 610 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 ADGRF1Q5T601 910 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 PEX5LQ8IYB4 626 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 SLC22A15Q8IZD6 547 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 TTC9BQ8N6N2 239 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 GPR156Q8NFN8 814 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 FOPNLQ96NB1 174 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 GSTK1Q9Y2Q3 226 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 EP400Q96L91 3159 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 ZNF236Q9UL36 1845 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 DUSP11O75319 330 aaKnown RBP10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 IGSF6O95976 241 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 ACRV1P26436 265 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 PIK3CBP42338 1070 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 GSTM5P46439 218 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 MXD1Q05195 221 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 SOWAHCQ53LP3 525 aaPredicted RBP10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 RNF165Q6ZSG1 346 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 NPAS3Q8IXF0 933 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 NXPE1Q8N323 547 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 HJURPQ8NCD3 748 aaPredicted RBP10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 SIMC1Q8NDZ2 872 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 IL17RDQ8NFM7 739 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 KLHL6Q8WZ60 621 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 AP3S1Q92572 193 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 FRMD6Q96NE9 622 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 CITED4Q96RK1 184 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 IRF2BPLQ9H1B7 796 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 C3orf14Q9HBI5 128 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 PCDHGB2Q9Y5G2 931 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 HMX3A6NHT5 357 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 CLDN7O95471 211 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 MYL12AP19105 171 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 TUFMP49411 452 aaKnown RBP10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 FCHO2Q0JRZ9 810 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 PTPRRQ15256 657 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 TAF1CQ15572 869 aaPredicted RBP10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 PRSS36Q5K4E3 855 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 GDPGP1Q6ZNW5 385 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 ZNF280BQ86YH2 543 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 UBQLNLQ8IYU4 475 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 B3GNT7Q8NFL0 401 aa10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 GEMIN6Q8WXD5 167 aaKnown RBP10.39□□□□□ -0.75
ATP2C1-204ENST00000428331 IL4I1Q96RQ9 567 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms