RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 PCDH19Q8TAB3 1148 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 TRMT10AQ8TBZ6 339 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 LPAR4Q99677 370 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 RBM4BQ9BQ04 359 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 RBM4Q9BWF3 364 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 KCPQ6ZWJ8 1503 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 BLOC1S5-TXNDC5H3BN57 136 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 OR7A10O76100 309 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 CDH1P12830 882 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 ENDOUP21128 410 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 ETV3P41162 512 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 TNFRSF4P43489 277 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 GBX2P52951 348 aaPredicted RBP9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 OR2B6P58173 313 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 AP3S2P59780 193 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 AGTRAPQ6RW13 159 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 SUSD1Q6UWL2 747 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 FAM131AQ6UXB0 335 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 SLC51AQ86UW1 340 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 IRF2BP1Q8IU81 584 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 ZNF784Q8NCA9 323 aaPredicted RBP9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 OR4K14Q8NGD5 310 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 NTPCRQ9BSD7 190 aaKnown RBP9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 DUSP23Q9BVJ7 150 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 ZNF576Q9H609 170 aa9.65□□□□□ -0.86
CLTCL1-202ENST00000427926 PLK4O00444 970 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 TMEM35AQ53FP2 167 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 MANEAQ5SRI9 462 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 DENND5AQ6IQ26 1287 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 PAQR3Q6TCH7 311 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 ZZZ3Q8IYH5 903 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 CSNK1A1LQ8N752 337 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 GSTCDQ8NEC7 633 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 TRPV1Q8NER1 839 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 OR10A6Q8NH74 314 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 OR14L1PQ8NHC6 308 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 CPT1BQ92523 772 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 LPGAT1Q92604 370 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 TOP1MTQ969P6 601 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 ZNF347Q96SE7 839 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 TVP23BQ9NYZ1 205 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 SIT1Q9Y3P8 196 aa9.65□□□□□ -0.87
CLTCL1-202ENST00000427926 A0A1W2PPM1 405 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 GKP32189 559 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 SDC2P34741 201 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 GRM7Q14831 915 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 PRPF38BQ5VTL8 546 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 SLC39A4Q6P5W5 647 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ZNF627Q7L945 461 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ALYREFQ86V81 257 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 OSTM1Q86WC4 334 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ZNF565Q8N9K5 539 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 DIO2Q92813 273 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 RTKNQ9BST9 563 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 G6PC3Q9BUM1 346 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 PLLPQ9Y342 182 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 A0A1B0GVI7 797 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 HTR3EA5X5Y0 456 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 BCKDKO14874 412 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ADAMTS3O15072 1205 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 SNX3O60493 162 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ZNF16P17020 682 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ARL3P36405 182 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 CCT3P49368 545 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 STK19P49842 368 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ARSFP54793 590 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ARL13AQ5H913 290 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 GTF2IRD2BQ6EKJ0 949 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ZNF783Q6ZMS7 281 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 GTF2IRD2Q86UP8 949 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 TMEM17Q86X19 198 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ZNF384Q8TF68 577 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 DNAJA4Q8WW22 397 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 NKD2Q969F2 451 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 HSD3B7Q9H2F3 369 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 TPK1Q9H3S4 243 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 FAM208AQ9UK61 1670 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 SOCS5O75159 536 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ZBTB11O95625 1053 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 BPNT1O95861 308 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 HMGN1P05114 100 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 PGRP06401 933 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 BMP4P12644 408 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 RNH1P13489 461 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 EPCAMP16422 314 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 PSMA1P25786 263 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 CHRNB4P30926 498 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 SCN1BQ07699 218 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 PMS2P3Q13401 168 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 FAM189A2Q15884 450 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 UPP1Q16831 310 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ZNF598Q86UK7 904 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 ARL14Q8N4G2 192 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 DNAJB8Q8NHS0 232 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 SLC17A9Q9BYT1 436 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 LRRC4CQ9HCJ2 640 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 SAGE1Q9NXZ1 904 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 GDE1Q9NZC3 331 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 CNTN6Q9UQ52 1028 aa9.64□□□□□ -0.87
CLTCL1-202ENST00000427926 NALCNQ8IZF0 1738 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms