RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 TIA1P31483 386 aaKnown RBP eCLIP5.7□□□□□ -1.5
SSBP3-207ENST00000426150 USP8P40818 1118 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 WNT5AP41221 380 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 ALDH3A2P51648 485 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 CNTN2Q02246 1040 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 UBXN1Q04323 297 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 CUL3Q13618 768 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 GTF2H2Q13888 395 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 MDH1BQ5I0G3 518 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 OR7E24Q6IFN5 339 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 GTF2H2CQ6P1K8 395 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 ZNF517Q6ZMY9 492 aaPredicted RBP5.7□□□□□ -1.5
SSBP3-207ENST00000426150 C15orf39Q6ZRI6 1047 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 TMEM179Q6ZVK1 233 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 NUP54Q7Z3B4 507 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 PTOV1Q86YD1 416 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 L3MBTL4Q8NA19 623 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 SPC24Q8NBT2 197 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 RAD54LQ92698 747 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 STAMBPL1Q96FJ0 436 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 CCDC43Q96MW1 224 aaKnown RBP5.7□□□□□ -1.5
SSBP3-207ENST00000426150 NEURL2Q9BR09 285 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 VCPKMTQ9H867 229 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 MRPL44Q9H9J2 332 aaKnown RBP5.7□□□□□ -1.5
SSBP3-207ENST00000426150 CDH20Q9HBT6 801 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 ACKR4Q9NPB9 350 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 RIPK3Q9Y572 518 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 CACNA1IQ9P0X4 2223 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 GPR179Q6PRD1 2367 aa5.7□□□□□ -1.5
SSBP3-207ENST00000426150 TEX13DA0A0J9YY54 714 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 ASB14A6NK59 587 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 SRRM3A6NNA2 597 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 LOC730098B7Z3J9 87 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 LINC01565O15544 149 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 WDPCPO95876 746 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 RLN1P04808 185 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 SAGP10523 405 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 EEF2P13639 858 aaKnown RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 CDC25AP30304 524 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 KCNJ1P48048 391 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 ARCN1P48444 511 aaKnown RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 EEF1A1P68104 462 aaKnown RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 MAT1AQ00266 395 aaKnown RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 RELQ04864 619 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 HYAL1Q12794 435 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 DLG1Q12959 904 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 RCN2Q14257 317 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 PTGISQ16647 500 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 CDO1Q16878 200 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 LBHQ53QV2 105 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 SYT14P1Q58G82 188 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 EEF1A1P5Q5VTE0 462 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 PLXDC2Q6UX71 529 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 LINGO4Q6UY18 593 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 SATL1Q86VE3 508 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 COMMD2Q86X83 199 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 FBXO16Q8IX29 292 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 ARHGAP24Q8N264 748 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 CPSF7Q8N684 471 aaKnown RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 ARL10Q8N8L6 244 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 TMEM105Q8N8V8 129 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 RDM1Q8NG50 284 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 RNF128Q8TEB7 428 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 MTG1Q9BT17 334 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 CSTL1Q9H114 145 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 IL25Q9H293 177 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 TMEM206Q9H813 350 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 LMAN1LQ9HAT1 526 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 RAVER2Q9HCJ3 691 aaKnown RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 TRPC7Q9HCX4 862 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 IL1RAPL2Q9NP60 686 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 SERINC1Q9NRX5 453 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 B3GAT1Q9P2W7 334 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 WNT16Q9UBV4 365 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 VDAC3Q9Y277 283 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 DLGAP4Q9Y2H0 992 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 DDX49Q9Y6V7 483 aaKnown RBP5.69□□□□□ -1.5
SSBP3-207ENST00000426150 FOCADQ5VW36 1801 aa5.69□□□□□ -1.5
SSBP3-207ENST00000426150 A0A0G2JPF8 293 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 LRRD1A4D1F6 860 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 HNRNPCL3B7ZW38 293 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 SLC33A1O00400 549 aaPredicted RBP5.68□□□□□ -1.5
SSBP3-207ENST00000426150 ST8SIA3O43173 380 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 IDH1O75874 414 aaKnown RBP5.68□□□□□ -1.5
SSBP3-207ENST00000426150 TFAP2AP05549 437 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 LIPFP07098 398 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 HNRNPCL4P0DMR1 293 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 ACP2P11117 423 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 HLA-DOBP13765 273 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 CTNNB1P35222 781 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 SOAT1P35610 550 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 DLK1P80370 383 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 AP1B1Q10567 949 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 TNK1Q13470 666 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 FAM174BQ3ZCQ3 159 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 LRRC73Q5JTD7 316 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 NDUFAF5Q5TEU4 345 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 TXNRD3NBQ6F5E7 133 aa5.68□□□□□ -1.5
SSBP3-207ENST00000426150 SLC27A1Q6PCB7 646 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms