RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ZNF574Q6ZN55 896 aaPredicted RBP15.02■□□□□ -0
SHOX2-202ENST00000425436 GK5Q6ZS86 529 aa15.02■□□□□ -0
SHOX2-202ENST00000425436 TRIM46Q7Z4K8 759 aa15.02■□□□□ -0
SHOX2-202ENST00000425436 AMIGO1Q86WK6 493 aa15.02■□□□□ -0
SHOX2-202ENST00000425436 DCUN1D3Q8IWE4 304 aa15.02■□□□□ -0
SHOX2-202ENST00000425436 CCDC138Q96M89 665 aa15.02■□□□□ -0
SHOX2-202ENST00000425436 AIG1Q9NVV5 245 aa15.02■□□□□ -0
SHOX2-202ENST00000425436 HRASLS2Q9NWW9 162 aa15.02■□□□□ -0
SHOX2-202ENST00000425436 PTPRBP23467 1997 aa15.02■□□□□ -0
SHOX2-202ENST00000425436 BTN3A3O00478 584 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 MRASO14807 208 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 DUX1O43812 170 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 UGDHO60701 494 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 SLC22A3O75751 556 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 CPNE6O95741 557 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 NPPAP01160 153 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 POLR2CP19387 275 aaPredicted RBP15.02□□□□□ -0.01
SHOX2-202ENST00000425436 PSME3P61289 254 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 PIGGQ5H8A4 983 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 C6orf136Q5SQH8 315 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 SNAP47Q5SQN1 464 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 PAOXQ6QHF9 649 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 FNDC5Q8NAU1 212 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 FBXO15Q8NCQ5 510 aaPredicted RBP15.02□□□□□ -0.01
SHOX2-202ENST00000425436 ADAMTS14Q8WXS8 1223 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 RAD51AP1Q96B01 352 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 PKP4Q99569 1192 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 NPAS2Q99743 824 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 SEMA6CQ9H3T2 930 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 NKX1-2Q9UD57 310 aaPredicted RBP15.02□□□□□ -0.01
SHOX2-202ENST00000425436 KLHL3Q9UH77 587 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 CROTQ9UKG9 612 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 SNX6Q9UNH7 406 aa15.02□□□□□ -0.01
SHOX2-202ENST00000425436 COL27A1Q8IZC6 1860 aaPredicted RBP15.01□□□□□ -0.01
SHOX2-202ENST00000425436 ANGPT2O15123 496 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 CFLARO15519 480 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 MT-CO3P00414 261 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 CDK4P11802 303 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 SLC6A12P48065 614 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 GFERP55789 205 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 KCNK10P57789 538 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 FOXM1Q08050 763 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 FOXC1Q12948 553 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 C18orf21Q32NC0 220 aaPredicted RBP15.01□□□□□ -0.01
SHOX2-202ENST00000425436 SWT1Q5T5J6 900 aaKnown RBP15.01□□□□□ -0.01
SHOX2-202ENST00000425436 CDCP2Q5VXM1 449 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 BLOC1S3Q6QNY0 202 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 RBM44Q6ZP01 1051 aaKnown RBP15.01□□□□□ -0.01
SHOX2-202ENST00000425436 Q6ZSR9 355 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 B3GNT8Q7Z7M8 397 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 HPS6Q86YV9 775 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 FUNDC1Q8IVP5 155 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 KLHDC8AQ8IYD2 350 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 FAM9CQ8IZT9 166 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 PPFIBP2Q8ND30 876 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 HMGCLL1Q8TB92 370 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 TGM7Q96PF1 710 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 MENTQ9BUN1 341 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 ACTR8Q9H981 624 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 SPAG4Q9NPE6 437 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 DNAJC11Q9NVH1 559 aa15.01□□□□□ -0.01
SHOX2-202ENST00000425436 EIF3LQ9Y262 564 aaKnown RBP15.01□□□□□ -0.01
SHOX2-202ENST00000425436 A0A1W2PP18 115 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 SERTM1A2A2V5 107 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 OR5K3A6NET4 321 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 A8MU76 341 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 D6RAR5 112 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 H0Y3Z8 333 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 CAPN5O15484 640 aaPredicted RBP15□□□□□ -0.01
SHOX2-202ENST00000425436 HYAL3O43820 417 aaPredicted RBP15□□□□□ -0.01
SHOX2-202ENST00000425436 KRT36O76013 467 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 PDE5AO76074 875 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 JUPP14923 745 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 GDF5P43026 501 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 CAPZBP47756 277 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 TRAP1Q12931 704 aaKnown RBP15□□□□□ -0.01
SHOX2-202ENST00000425436 SQSTM1Q13501 440 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 NR6A1Q15406 480 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 SAMD4BQ5PRF9 694 aaKnown RBP15□□□□□ -0.01
SHOX2-202ENST00000425436 IRGCQ6NXR0 463 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 ZFP1Q6P2D0 407 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 MBOAT1Q6ZNC8 495 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 FAM92BQ6ZTR7 304 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 ADGRF3Q8IZF5 1079 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 SNX31Q8N9S9 440 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 L3MBTL4Q8NA19 623 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 OR9A1PQ8NGU1 263 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 USP7Q93009 1102 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 CDK15Q96Q40 435 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 S100A14Q9HCY8 104 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 SPHK1Q9NYA1 384 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 CLCA2Q9UQC9 943 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 PCDHGA7Q9Y5G6 932 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 PTGDR2Q9Y5Y4 395 aa15□□□□□ -0.01
SHOX2-202ENST00000425436 PCM1Q15154 2024 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 FAM234BA2RU67 622 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 GSAPA4D1B5 854 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 FBP2O00757 339 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 LSM1O15116 133 aaKnown RBP14.99□□□□□ -0.01
SHOX2-202ENST00000425436 KIF1CO43896 1103 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms