RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 CDKL2Q92772 493 aa9.69□□□□□ -0.86
HDLBP-206ENST00000417540 ATOH8Q96SQ7 321 aa9.69□□□□□ -0.86
HDLBP-206ENST00000417540 FMO2Q99518 471 aa9.69□□□□□ -0.86
HDLBP-206ENST00000417540 YIPF2Q9BWQ6 316 aa9.69□□□□□ -0.86
HDLBP-206ENST00000417540 KLHL31Q9H511 634 aa9.69□□□□□ -0.86
HDLBP-206ENST00000417540 POPDC3Q9HBV1 291 aa9.69□□□□□ -0.86
HDLBP-206ENST00000417540 ZNF160Q9HCG1 818 aa9.69□□□□□ -0.86
HDLBP-206ENST00000417540 NSMCE4AQ9NXX6 385 aa9.69□□□□□ -0.86
HDLBP-206ENST00000417540 C3orf18Q9UK00 162 aa9.69□□□□□ -0.86
HDLBP-206ENST00000417540 UTP20O75691 2785 aaKnown RBP9.68□□□□□ -0.86
HDLBP-206ENST00000417540 SUPT3HB4E1H0 165 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 NDC80O14777 642 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 OR1F1O43749 312 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 SRPX2O60687 465 aaPredicted RBP9.68□□□□□ -0.86
HDLBP-206ENST00000417540 SUPT3HO75486 399 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 ONECUT2O95948 504 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 F10P00742 488 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 FAM153BP0C7A2 387 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 RHOXF2BP0C7M4 288 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 STMN1P16949 149 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 MMP11P24347 488 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 GCAP28676 217 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 HNRNPH1P31943 449 aaKnown RBP9.68□□□□□ -0.86
HDLBP-206ENST00000417540 SLC26A3P40879 764 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 SCTRP47872 440 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 POU4F1Q01851 419 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 CAV1Q03135 178 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 NAA25Q14CX7 972 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 PCOLCEQ15113 449 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 TUBB8Q3ZCM7 444 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 FAM153CQ494X1 144 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 MROH9Q5TGP6 573 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 YOD1Q5VVQ6 348 aaPredicted RBP9.68□□□□□ -0.86
HDLBP-206ENST00000417540 SLC6A19Q695T7 634 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 TCTN3Q6NUS6 607 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 RPS27LQ71UM5 84 aaKnown RBP9.68□□□□□ -0.86
HDLBP-206ENST00000417540 KLHDC8AQ8IYD2 350 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 GALNT16Q8N428 558 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 NKAPQ8N5F7 415 aaKnown RBP9.68□□□□□ -0.86
HDLBP-206ENST00000417540 PDPRQ8NCN5 879 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 ABHD11Q8NFV4 315 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 OR11G2Q8NGC1 345 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 MIEF2Q96C03 454 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 NXNL1Q96CM4 212 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 TM4SF19Q96DZ7 209 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 PDLIM5Q96HC4 596 aaKnown RBP9.68□□□□□ -0.86
HDLBP-206ENST00000417540 PAFAH2Q99487 392 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 RHOXF2Q9BQY4 288 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 VN1R1Q9GZP7 353 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 EPB41L4BQ9H329 900 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 CLMPQ9H6B4 373 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 ACSS3Q9H6R3 686 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 ZNF552Q9H707 407 aaPredicted RBP9.68□□□□□ -0.86
HDLBP-206ENST00000417540 WDR54Q9H977 334 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 MLXIPLQ9NP71 852 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 TMEM184CQ9NVA4 438 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 TXNDC16Q9P2K2 825 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 ZNF282Q9UDV7 671 aaPredicted RBP9.68□□□□□ -0.86
HDLBP-206ENST00000417540 NFU1Q9UMS0 254 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 NOVA2Q9UNW9 492 aaKnown RBP9.68□□□□□ -0.86
HDLBP-206ENST00000417540 DYRK1BQ9Y463 629 aa9.68□□□□□ -0.86
HDLBP-206ENST00000417540 TRBC2A0A5B9 178 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 PABPN1LA6NDY0 278 aaKnown RBP9.67□□□□□ -0.86
HDLBP-206ENST00000417540 IDSB3KWA1 339 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 AGPSO00116 658 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 MAP2K7O14733 419 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 SH3BGRLO75368 114 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 SEC24DO94855 1032 aaPredicted RBP9.67□□□□□ -0.86
HDLBP-206ENST00000417540 NSA2O95478 260 aaKnown RBP9.67□□□□□ -0.86
HDLBP-206ENST00000417540 ANXA5P08758 320 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 HIST1H2AGP0C0S8 130 aaPredicted RBP9.67□□□□□ -0.86
HDLBP-206ENST00000417540 RNF224P0DH78 156 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 HIST1H2ADP20671 130 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 ITGA3P26006 1051 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 XCR1P46094 333 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 CCR8P51685 355 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 HNRNPFP52597 415 aaKnown RBP9.67□□□□□ -0.86
HDLBP-206ENST00000417540 SLC12A2P55011 1212 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 RAB8AP61006 207 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 CDKL1Q00532 357 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 SRSF11Q05519 484 aaKnown RBP9.67□□□□□ -0.86
HDLBP-206ENST00000417540 KLRB1Q12918 225 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 CDC16Q13042 620 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 DEFB134Q4QY38 66 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 TOR1AIP1Q5JTV8 583 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 B3GNTL1Q67FW5 361 aaPredicted RBP9.67□□□□□ -0.86
HDLBP-206ENST00000417540 PRMT9Q6P2P2 845 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 NXPE4Q6UWF7 544 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 RAPH1Q70E73 1250 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 PARP9Q8IXQ6 854 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 AFAP1L2Q8N4X5 818 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 SNX31Q8N9S9 440 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 TMEM52Q8NDY8 209 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 OR4K1Q8NGD4 311 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 CREB3L4Q8TEY5 395 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 DCAKDQ8WVC6 231 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 PEX11GQ96HA9 241 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 HIST1H2AHQ96KK5 128 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 UBXN10Q96LJ8 280 aa9.67□□□□□ -0.86
HDLBP-206ENST00000417540 CSF3RQ99062 836 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms