RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ATG10Q9H0Y0 220 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 RUBCNLQ9H714 662 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 KCNK13Q9HB14 408 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 PARVBQ9HBI1 364 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 TAS2R13Q9NYV9 303 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 SH2B3Q9UQQ2 575 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 NEU2Q9Y3R4 380 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 CENPEQ02224 2701 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 ZGRF1Q86YA3 2104 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 OR2W5A6NFC9 320 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 CCL21O00585 134 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 CDH1P12830 882 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 PRF1P14222 555 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 CA7P43166 264 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 PMP22Q01453 160 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 ABRAXAS2Q15018 415 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 EXT1Q16394 746 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 CYP1B1Q16678 543 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 FCRLBQ6BAA4 426 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 CAPN13Q6MZZ7 669 aaPredicted RBP13.61□□□□□ -0.23
PAF1-202ENST00000416728 H3F3CQ6NXT2 135 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 PCGF5Q86SE9 256 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 SLC26A11Q86WA9 606 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 PPIL6Q8IXY8 311 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 C2CD4AQ8NCU7 369 aaPredicted RBP13.61□□□□□ -0.23
PAF1-202ENST00000416728 TM4SF19Q96DZ7 209 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 CCDC120Q96HB5 630 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 UNKQ9C0B0 810 aaKnown RBP13.61□□□□□ -0.23
PAF1-202ENST00000416728 SH3BGRL2Q9UJC5 107 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 PPP2R2CQ9Y2T4 447 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 NAALAD2Q9Y3Q0 740 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 JRKLQ9Y4A0 524 aa13.61□□□□□ -0.23
PAF1-202ENST00000416728 KLF2Q9Y5W3 355 aaPredicted RBP13.61□□□□□ -0.23
PAF1-202ENST00000416728 PABPN1LA6NDY0 278 aaKnown RBP13.6□□□□□ -0.23
PAF1-202ENST00000416728 PGRMC1O00264 195 aaKnown RBP13.6□□□□□ -0.23
PAF1-202ENST00000416728 SLC16A5O15375 505 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 TTI1O43156 1089 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 NRDCO43847 1150 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 LCMT2O60294 686 aaKnown RBP13.6□□□□□ -0.23
PAF1-202ENST00000416728 CDC123O75794 336 aaPredicted RBP13.6□□□□□ -0.23
PAF1-202ENST00000416728 HIST1H2AGP0C0S8 130 aaPredicted RBP13.6□□□□□ -0.23
PAF1-202ENST00000416728 PGAM1P18669 254 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 HIST1H2ADP20671 130 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 IL10P22301 178 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 CASP6P55212 293 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 CCZ1BP86790 482 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 CCZ1P86791 482 aaPredicted RBP13.6□□□□□ -0.23
PAF1-202ENST00000416728 CRYMQ14894 314 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 NSDHLQ15738 373 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 MEP1AQ16819 746 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 PAPD4Q6PIY7 484 aaKnown RBP13.6□□□□□ -0.23
PAF1-202ENST00000416728 PAQR3Q6TCH7 311 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 LCTLQ6UWM7 567 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 RPTNQ6XPR3 784 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 MRGPRGQ86SM5 289 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 PDSS2Q86YH6 399 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 MCEMP1Q8IX19 187 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 ZNF808Q8N4W9 903 aaPredicted RBP13.6□□□□□ -0.23
PAF1-202ENST00000416728 SLC5A8Q8N695 610 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 M1APQ8TC57 530 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 GRK7Q8WTQ7 553 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 MOCOSQ96EN8 888 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 LINGO1Q96FE5 620 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 HIST1H2AHQ96KK5 128 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 OR1F2PQ96R84 312 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 LPAR4Q99677 370 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 HIST1H2AJQ99878 128 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 UTP23Q9BRU9 249 aaKnown RBP13.6□□□□□ -0.23
PAF1-202ENST00000416728 HAUS8Q9BT25 410 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 H2AFJQ9BTM1 129 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 SGPP1Q9BX95 441 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 RBCK1Q9BYM8 510 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 MMP25Q9NPA2 562 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 PCDHGB6Q9Y5F9 930 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 SLC22A7Q9Y694 548 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 CELSR2Q9HCU4 2923 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 HEATR5BQ9P2D3 2071 aa13.6□□□□□ -0.23
PAF1-202ENST00000416728 ZNF860A6NHJ4 632 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 SLC19A2O60779 497 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 MLYCDO95822 493 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 NPPBP16860 134 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 TIAL1Q01085 375 aaKnown RBP eCLIP13.59□□□□□ -0.23
PAF1-202ENST00000416728 ACTN3Q08043 901 aaPredicted RBP13.59□□□□□ -0.23
PAF1-202ENST00000416728 DHX9Q08211 1270 aaKnown RBP13.59□□□□□ -0.23
PAF1-202ENST00000416728 TUBA3CQ13748 450 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 HERC3Q15034 1050 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 PHKG1Q16816 387 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 SFT2D3Q587I9 215 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 TUBA3EQ6PEY2 450 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 BNC2Q6ZN30 1099 aaPredicted RBP13.59□□□□□ -0.23
PAF1-202ENST00000416728 CRLF3Q8IUI8 442 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 MFSD9Q8NBP5 474 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 PLPP5Q8NEB5 264 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 PEX11GQ96HA9 241 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 KLHL1Q9NR64 748 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 ANKRD10Q9NXR5 420 aa13.59□□□□□ -0.23
PAF1-202ENST00000416728 GOLGA6L10A0A0M3HER8 536 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 MAGEB17A8MXT2 336 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 FAM227AF5H4B4 570 aa13.58□□□□□ -0.23
PAF1-202ENST00000416728 NDUFS4O43181 175 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms