RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 OR52E4Q8NGH9 312 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 CXorf56Q9H5V9 222 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 C8orf33Q9H7E9 229 aaPredicted RBP19.88■□□□□ 0.77
USP39-203ENST00000409470 C8orf4Q9NR00 106 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 CUEDC1Q9NWM3 386 aaPredicted RBP19.88■□□□□ 0.77
USP39-203ENST00000409470 PCDHGB4Q9UN71 923 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 PCDHGB5Q9Y5G0 923 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 ANKDD1BA6NHY2 528 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 PDZK1P1A8MUH7 402 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 KLK1P06870 262 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 RETP07949 1114 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 CXCR2P25025 360 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 CCR8P51685 355 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 MRPS21P82921 87 aaKnown RBP19.88■□□□□ 0.77
USP39-203ENST00000409470 MLF2Q15773 248 aaPredicted RBP19.88■□□□□ 0.77
USP39-203ENST00000409470 IER5LQ5T953 404 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 SPRED1Q7Z699 444 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 SERPINA11Q86U17 422 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 COQ8BQ96D53 544 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 CXorf40BQ96DE9 158 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 SLC47A1Q96FL8 570 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 REEP4Q9H6H4 257 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 CARS2Q9HA77 564 aaKnown RBP19.88■□□□□ 0.77
USP39-203ENST00000409470 BTNL2Q9UIR0 455 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 MTCH2Q9Y6C9 303 aa19.88■□□□□ 0.77
USP39-203ENST00000409470 SCAMP1O15126 338 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 ACOX3O15254 700 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 KCNJ13O60928 360 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 DEAF1O75398 565 aaPredicted RBP19.87■□□□□ 0.77
USP39-203ENST00000409470 RASAL1O95294 804 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 FAM58BPP0C7Q3 252 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 ZNF23P17027 643 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 ZCCHC8Q6NZY4 707 aaKnown RBP19.87■□□□□ 0.77
USP39-203ENST00000409470 ISLR2Q6UXK2 745 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 USP30Q70CQ3 517 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 VN1R5Q7Z5H4 357 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 APLFQ8IW19 511 aaPredicted RBP19.87■□□□□ 0.77
USP39-203ENST00000409470 CHERPQ8IWX8 916 aaKnown RBP19.87■□□□□ 0.77
USP39-203ENST00000409470 NETO1Q8TDF5 533 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 C16orf78Q8WTQ4 265 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 TRPV5Q9NQA5 729 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 DCAF13Q9NV06 445 aaKnown RBP19.87■□□□□ 0.77
USP39-203ENST00000409470 CD207Q9UJ71 328 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 PCDHB11Q9Y5F2 797 aa19.87■□□□□ 0.77
USP39-203ENST00000409470 H3BQ06 376 aaPredicted RBP19.86■□□□□ 0.77
USP39-203ENST00000409470 PRKD3O94806 890 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 SERPINA1P01009 418 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 CYP4F2P78329 520 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 C2orf80Q0P641 193 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 CLCA4Q14CN2 919 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 NHSL2Q5HYW2 709 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 LPCAT2Q7L5N7 544 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 ZNF551Q7Z340 670 aaPredicted RBP19.86■□□□□ 0.77
USP39-203ENST00000409470 R3HCC1LQ7Z5L2 792 aaKnown RBP19.86■□□□□ 0.77
USP39-203ENST00000409470 MFSD2AQ8NA29 543 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 LINC01555Q8NAE3 123 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 PNPT1Q8TCS8 783 aaKnown RBP19.86■□□□□ 0.77
USP39-203ENST00000409470 ABHD8Q96I13 439 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 MRGPRX1Q96LB2 322 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 CAMK1GQ96NX5 476 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 WASH6PQ9NQA3 447 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 ATP6V1HQ9UI12 483 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 EXO1Q9UQ84 846 aaKnown RBP19.86■□□□□ 0.77
USP39-203ENST00000409470 ERVK-11Q9UQG0 969 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 NUP214P35658 2090 aaPredicted RBP19.86■□□□□ 0.77
USP39-203ENST00000409470 A0A1W2PPV9 198 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 C2CD4DB7Z1M9 353 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 H7BY64 318 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 EI24O14681 340 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 C1QCP02747 245 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 LINGO3P0C6S8 592 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 TAS2R50P59544 299 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 SFSWAPQ12872 951 aaKnown RBP19.86■□□□□ 0.77
USP39-203ENST00000409470 RPLP0P6Q8NHW5 317 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 PRAP1Q96NZ9 151 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 BHLHE41Q9C0J9 482 aaPredicted RBP19.86■□□□□ 0.77
USP39-203ENST00000409470 XKR8Q9H6D3 395 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 ATAD3AQ9NVI7 634 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 AHSPQ9NZD4 102 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 SPASTQ9UBP0 616 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 BRWD1Q9NSI6 2320 aa19.86■□□□□ 0.77
USP39-203ENST00000409470 OR52A4PA6NMU1 304 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 TNFAIP8O95379 198 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 BMP8BP34820 402 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 RPL3P39023 403 aaKnown RBP19.85■□□□□ 0.77
USP39-203ENST00000409470 RAB28P51157 221 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 CLDN2P57739 230 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 TXNL4AP83876 142 aaKnown RBP19.85■□□□□ 0.77
USP39-203ENST00000409470 LRRC74AQ0VAA2 488 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 NKG7Q16617 165 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 IYDQ6PHW0 289 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 ABHD11Q8NFV4 315 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 OR4A15Q8NGL6 344 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.85■□□□□ 0.77
USP39-203ENST00000409470 PPCDCQ96CD2 204 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 RHBGQ9H310 441 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 TPT1P8Q9HAU6 139 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 KCNK12Q9HB15 430 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 FGF22Q9HCT0 170 aa19.85■□□□□ 0.77
USP39-203ENST00000409470 MYNNQ9NPC7 610 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms