RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 YY2O15391 372 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 RETP07949 1114 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 CCR8P51685 355 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 PPP2CBP62714 309 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 PPP2CAP67775 309 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 ENPP6Q6UWR7 440 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 USP30Q70CQ3 517 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 C10orf111Q8N326 155 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 MFSD2AQ8NA29 543 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 ASB12Q8WXK4 309 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 POP5Q969H6 163 aaKnown RBP23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 CAMK1GQ96NX5 476 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 IMP3Q9NV31 184 aaKnown RBP23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 CD207Q9UJ71 328 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 MTCH2Q9Y6C9 303 aa23.69■■□□□ 1.38
DNMT3A-206ENST00000406659 F5P12259 2224 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 DEAF1O75398 565 aaPredicted RBP23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 RASAL1O95294 804 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 GBAP04062 536 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 FAM58BPP0C7Q3 252 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 EFNA1P20827 205 aaPredicted RBP23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 BMP8BP34820 402 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 MLF2Q15773 248 aaPredicted RBP23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 KIAA1324Q6UXG2 1013 aaKnown RBP23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 SERPINA11Q86U17 422 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 C16orf78Q8WTQ4 265 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 SLC47A1Q96FL8 570 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 CXorf56Q9H5V9 222 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 WASH6PQ9NQA3 447 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 DCAF13Q9NV06 445 aaKnown RBP23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 CUEDC1Q9NWM3 386 aaPredicted RBP23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 AHSPQ9NZD4 102 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 ACOX3O15254 700 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 KLK1P06870 262 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 RPL3P39023 403 aaKnown RBP23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 LRRC74AQ0VAA2 488 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 IER5LQ5T953 404 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 VN1R5Q7Z5H4 357 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 R3HCC1LQ7Z5L2 792 aaKnown RBP23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 FAM86B1Q8N7N1 296 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 NETO1Q8TDF5 533 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 ABHD8Q96I13 439 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 BHLHE41Q9C0J9 482 aaPredicted RBP23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 RHBGQ9H310 441 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 ATAD3AQ9NVI7 634 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 PCDHB11Q9Y5F2 797 aa23.68■■□□□ 1.38
DNMT3A-206ENST00000406659 PDZK1P1A8MUH7 402 aa23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 PSMB5P28074 263 aa23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 TXNL4AP83876 142 aaKnown RBP23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 C2orf80Q0P641 193 aa23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 SLC14A1Q13336 389 aa23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 GK3PQ14409 553 aa23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 ZCCHC8Q6NZY4 707 aaKnown RBP23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 CHERPQ8IWX8 916 aaKnown RBP23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 ABHD11Q8NFV4 315 aa23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 CARS2Q9HA77 564 aaKnown RBP23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 MYNNQ9NPC7 610 aa23.67■■□□□ 1.38
DNMT3A-206ENST00000406659 A0A1W2PPV9 198 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 PRKD3O94806 890 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 SERPINA1P01009 418 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 ZNF23P17027 643 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 GPX2P18283 190 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 CLCN2P51788 898 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 CLCA4Q14CN2 919 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 NHSL2Q5HYW2 709 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 MRGPRX1Q96LB2 322 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 PHF12Q96QT6 1004 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 VPS4AQ9UN37 437 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 PCDHGB4Q9UN71 923 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 EXO1Q9UQ84 846 aaKnown RBP23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 ERVK-11Q9UQG0 969 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 PCDHGB5Q9Y5G0 923 aa23.66■■□□□ 1.38
DNMT3A-206ENST00000406659 C2CD4DB7Z1M9 353 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 H7BY64 318 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 RNASET2O00584 256 aaKnown RBP23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 TNFAIP8O95379 198 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 LINGO3P0C6S8 592 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 C7P10643 843 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 PPIBP23284 216 aaKnown RBP23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 REEP5Q00765 189 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 EOGTQ5NDL2 527 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 ERICH5Q6P6B1 374 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 ZNF551Q7Z340 670 aaPredicted RBP23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 SLC44A3Q8N4M1 653 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 LINC01555Q8NAE3 123 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 OR4A15Q8NGL6 344 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 PRAP1Q96NZ9 151 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 RAB11FIP5Q9BXF6 653 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 PITHD1Q9GZP4 211 aaPredicted RBP23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 MVB12BQ9H7P6 319 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 NT5DC2Q9H857 520 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 AASDHPPTQ9NRN7 309 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 OLAHQ9NV23 265 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 SPASTQ9UBP0 616 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 HOXC4P09017 264 aaPredicted RBP23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 SERPINB1P30740 379 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 RAB28P51157 221 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 TAS2R50P59544 299 aa23.65■■□□□ 1.38
DNMT3A-206ENST00000406659 CTBSQ01459 385 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms