RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 PAPSS2O95340 614 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 FGF5P12034 268 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 CDH3P22223 829 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 CETN2P41208 172 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 FMO5P49326 533 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 ART1P52961 327 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 DVL1P1P54792 670 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 CETN1Q12798 172 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 PKN2Q16513 984 aaKnown RBP4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 MTHFSDQ2M296 383 aaKnown RBP4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 ITPRIPL2Q3MIP1 535 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 SLC35D3Q5M8T2 416 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 CCNYL2Q5T2Q4 361 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 BTNL8Q6UX41 500 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 TOM1L2Q6ZVM7 507 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 MCM10Q7L590 875 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 RABEPKQ7Z6M1 372 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 SPATA2LQ8IUW3 424 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 OR11H4Q8NGC9 324 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 OR52N5Q8NH56 324 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 ST7LQ8TDW4 575 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 PIGBQ92521 554 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 GDAP1L1Q96MZ0 367 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 IL17FQ96PD4 163 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 MAP3K3Q99759 626 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 FSD1Q9BTV5 496 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 IDI2Q9BXS1 227 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 NACAP1Q9BZK3 213 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 UBQLN3Q9H347 655 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 CYP39A1Q9NYL5 469 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 ISY1Q9ULR0 285 aaKnown RBP4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 STUB1Q9UNE7 303 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 PCDHGA1Q9Y5H4 931 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 TTC3P53804 2025 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 ABCC4O15439 1325 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 ARHGEF10O15013 1369 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 FLT4P35916 1363 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 KIAA0232Q92628 1395 aa4.39□□□□□ -1.71
HMGB3P18-201ENST00000406327 ANKARQ7Z5J8 1434 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 ANKRD26Q9UPS8 1709 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 CCDC69A6NI79 296 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 RTCAO00442 366 aaKnown RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 ZNF197O14709 1029 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 SCO2O43819 266 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 XPNPEP2O43895 674 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 SBK2P0C263 348 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 ANKRD34CP0C6C1 535 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 EFNA1P20827 205 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 CA6P23280 308 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 MAPK3P27361 379 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 EPHA2P29317 976 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 CSTF2P33240 577 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 SFTPDP35247 375 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 CDKN2AP42771 156 aaKnown RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 OR3A3P47888 321 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 SERPINH1P50454 418 aaKnown RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 MAZP56270 477 aaKnown RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 DSCR9P59020 149 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 HERV-K104P61576 105 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 LGALS3BPQ08380 585 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 TRAP1Q12931 704 aaKnown RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 DMP1Q13316 513 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 STXBP2Q15833 593 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 ACKR1Q16570 336 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 SGCBQ16585 318 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 PDLIM3Q53GG5 364 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 TOR1AIP1Q5JTV8 583 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 FAM166AQ6J272 317 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 CTR9Q6PD62 1173 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 PODNL1Q6PEZ8 512 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 MIER3Q7Z3K6 550 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 CNTN4Q8IWV2 1026 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 PRSS35Q8N3Z0 413 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 HDDC3Q8N4P3 179 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 KIAA0895Q8NCT3 520 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 ANKRD20A12PQ8NF67 263 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 OR10Q1Q8NGQ4 319 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 HSD17B8Q92506 261 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 NEUROG1Q92886 237 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 MED30Q96HR3 178 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 TSSK2Q96PF2 358 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 PANX3Q96QZ0 392 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 RUFY1Q96T51 708 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 NAP1L3Q99457 506 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 OSBPL8Q9BZF1 889 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 C6orf106Q9H6K1 298 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 RNF121Q9H920 327 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 UPF2Q9HAU5 1272 aaKnown RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 CD93Q9NPY3 652 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 FAM207AQ9NSI2 230 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 PNPLA3Q9NST1 481 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 SLC12A6Q9UHW9 1150 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 MAN1B1Q9UKM7 699 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 TDRKHQ9Y2W6 561 aaKnown RBP4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 PCSK5Q92824 1860 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 KDRP35968 1356 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 KIF24Q5T7B8 1368 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 CRB1P82279 1406 aa4.38□□□□□ -1.71
HMGB3P18-201ENST00000406327 DIP2AQ14689 1571 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms