RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SLC47A1Q96FL8 570 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 SAMD8Q96LT4 415 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 FAM213AQ9BRX8 229 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 POLR3CQ9BUI4 534 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 PANK2Q9BZ23 570 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 WWTR1Q9GZV5 400 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 C10orf88Q9H8K7 445 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 FGF21Q9NSA1 209 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 FAM118AQ9NWS6 357 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 KCNN3Q9UGI6 736 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 SLC7A7Q9UM01 511 aa4.48□□□□□ -1.69
HMGB1P13-201ENST00000406019 LOC101059948A0A1B0GTJ6 334 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 PLSCR5A0PG75 271 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 ANKRD61A6NGH8 418 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 TULP2O00295 520 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 SMPD2O60906 423 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 TGFAP01135 160 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 CXCL10P02778 98 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 CCDC192P0DO97 292 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 DAOP14920 347 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 UGT1A6P19224 532 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 CNN1P51911 297 aaKnown RBP4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 DLX5P56178 289 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 GCNT1Q02742 428 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 CETN1Q12798 172 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 TRAP1Q12931 704 aaKnown RBP4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 SNTA1Q13424 505 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 SF3B4Q15427 424 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 ACKR1Q16570 336 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZC2HC1CQ53FD0 456 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 ISLR2Q6UXK2 745 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 DLEU7Q6UYE1 221 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 RBM43Q6ZSC3 357 aaKnown RBP4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZNF771Q7L3S4 317 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 PRUNE1Q86TP1 453 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 RPAINQ86UA6 219 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 RTN4RL2Q86UN3 420 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 RFLNBQ8N5W9 214 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 CCNYQ8ND76 341 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 TMEM185AQ8NFB2 350 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZNF473Q8WTR7 871 aaKnown RBP4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 ANP32BQ92688 251 aaKnown RBP4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 ADGRG7Q96K78 797 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 RIMS4Q9H426 269 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 LRRC4Q9HBW1 653 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 PTTG2Q9NZH5 202 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 SH3BGRL2Q9UJC5 107 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 POU2F3Q9UKI9 436 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 KCNJ14Q9UNX9 436 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 PLEKHA6Q9Y2H5 1048 aa4.47□□□□□ -1.69
HMGB1P13-201ENST00000406019 FAM205AQ6ZU69 1335 aa4.46□□□□□ -1.69
HMGB1P13-201ENST00000406019 SYNRGQ9UMZ2 1314 aa4.46□□□□□ -1.69
HMGB1P13-201ENST00000406019 IGHV4OR15-8A0A075B7B6 117 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 ANTXRLA6NF34 631 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 CFAP73A6NFT4 308 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 RASGRF2O14827 1237 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 PRKRAO75569 313 aaKnown RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 MT-ATP6P00846 226 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 PDGFBP01127 241 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 HEXBP07686 556 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 IGHV4-31P0DP07 118 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 GHRP10912 638 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 FERP16591 822 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 MSH3P20585 1137 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 EFNA1P20827 205 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 CDH3P22223 829 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 EPHA2P29317 976 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 ASMTP46597 345 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 NR2C2P49116 596 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 SRP54P61011 504 aaKnown RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 FKBP1BP68106 108 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 MAP2K1Q02750 393 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 GK2Q14410 553 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 KRTAP24-1Q3LI83 254 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 XKR3Q5GH77 459 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 SLC35D3Q5M8T2 416 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 DCAF10Q5QP82 559 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 WBP2NLQ6ICG8 309 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 TTC27Q6P3X3 843 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 PSRC1Q6PGN9 363 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 UNC5DQ6UXZ4 953 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 Q6ZTC4 211 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 CPEB2Q7Z5Q1 589 aaKnown RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 CCDC60Q8IWA6 550 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 SIDT2Q8NBJ9 832 aaKnown RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 GGHQ92820 318 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 RBM41Q96IZ5 413 aaKnown RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 DUX5Q96PT3 197 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 ALKBH7Q9BT30 221 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 LRRC1Q9BTT6 524 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 MTMR12Q9C0I1 747 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 C5orf66Q9H5L9 145 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 RAVER2Q9HCJ3 691 aaKnown RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 ZCCHC3Q9NUD5 404 aaKnown RBP4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 UBE4BO95155 1302 aa4.46□□□□□ -1.7
HMGB1P13-201ENST00000406019 DOCK7Q96N67 2140 aa4.45□□□□□ -1.7
HMGB1P13-201ENST00000406019 SCN5AQ14524 2016 aa4.45□□□□□ -1.7
HMGB1P13-201ENST00000406019 ARID2Q68CP9 1835 aa4.45□□□□□ -1.7
HMGB1P13-201ENST00000406019 SLC15A5A6NIM6 579 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms